Protein–RNA interactions for Protein: A6NCL2

LRCOL1, Leucine-rich colipase-like protein 1, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCOL1A6NCL2 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
LRCOL1A6NCL2 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC10.13□□□□□ -0.79
LRCOL1A6NCL2 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC10.13□□□□□ -0.79
LRCOL1A6NCL2 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
LRCOL1A6NCL2 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC10.13□□□□□ -0.79
LRCOL1A6NCL2 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
LRCOL1A6NCL2 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC10.13□□□□□ -0.79
LRCOL1A6NCL2 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
LRCOL1A6NCL2 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
LRCOL1A6NCL2 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
LRCOL1A6NCL2 AC007787.1-201ENST00000588095 1583 ntBASIC10.13□□□□□ -0.79
LRCOL1A6NCL2 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
LRCOL1A6NCL2 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC10.13□□□□□ -0.79
LRCOL1A6NCL2 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
LRCOL1A6NCL2 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
LRCOL1A6NCL2 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
LRCOL1A6NCL2 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC10.13□□□□□ -0.79
LRCOL1A6NCL2 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC10.12□□□□□ -0.79
LRCOL1A6NCL2 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
LRCOL1A6NCL2 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
LRCOL1A6NCL2 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
LRCOL1A6NCL2 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
LRCOL1A6NCL2 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
LRCOL1A6NCL2 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC10.12□□□□□ -0.79
LRCOL1A6NCL2 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
LRCOL1A6NCL2 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC10.12□□□□□ -0.79
LRCOL1A6NCL2 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
LRCOL1A6NCL2 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC10.12□□□□□ -0.79
LRCOL1A6NCL2 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC10.12□□□□□ -0.79
LRCOL1A6NCL2 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC10.12□□□□□ -0.79
LRCOL1A6NCL2 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
LRCOL1A6NCL2 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
LRCOL1A6NCL2 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
LRCOL1A6NCL2 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
LRCOL1A6NCL2 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
LRCOL1A6NCL2 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
LRCOL1A6NCL2 ZBTB12BP-201ENST00000314232 1122 ntBASIC10.12□□□□□ -0.79
LRCOL1A6NCL2 RNU1-114P-201ENST00000365297 166 ntBASIC10.12□□□□□ -0.79
LRCOL1A6NCL2 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC10.12□□□□□ -0.79
LRCOL1A6NCL2 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
LRCOL1A6NCL2 MPV17-206ENST00000402722 827 ntTSL 3 BASIC10.12□□□□□ -0.79
LRCOL1A6NCL2 ACTBP8-201ENST00000403258 1108 ntBASIC10.12□□□□□ -0.79
LRCOL1A6NCL2 KLF2P2-201ENST00000416807 1039 ntBASIC10.12□□□□□ -0.79
LRCOL1A6NCL2 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
LRCOL1A6NCL2 CNN2P8-201ENST00000421872 913 ntBASIC10.12□□□□□ -0.79
LRCOL1A6NCL2 CSF2RBP1-201ENST00000447905 391 ntBASIC10.12□□□□□ -0.79
LRCOL1A6NCL2 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC10.12□□□□□ -0.79
LRCOL1A6NCL2 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC10.12□□□□□ -0.79
LRCOL1A6NCL2 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC10.12□□□□□ -0.79
LRCOL1A6NCL2 MFF-223ENST00000524634 647 ntTSL 2 BASIC10.12□□□□□ -0.79
LRCOL1A6NCL2 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC10.12□□□□□ -0.79
LRCOL1A6NCL2 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC10.12□□□□□ -0.79
LRCOL1A6NCL2 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC10.12□□□□□ -0.79
LRCOL1A6NCL2 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
LRCOL1A6NCL2 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC10.12□□□□□ -0.79
LRCOL1A6NCL2 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
LRCOL1A6NCL2 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC10.12□□□□□ -0.79
LRCOL1A6NCL2 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC10.12□□□□□ -0.79
LRCOL1A6NCL2 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
LRCOL1A6NCL2 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC10.12□□□□□ -0.79
LRCOL1A6NCL2 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
LRCOL1A6NCL2 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC10.12□□□□□ -0.79
LRCOL1A6NCL2 DENND4C-205ENST00000434457 6718 ntTSL 5 BASIC10.12□□□□□ -0.79
LRCOL1A6NCL2 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC10.12□□□□□ -0.79
LRCOL1A6NCL2 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
LRCOL1A6NCL2 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
LRCOL1A6NCL2 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
LRCOL1A6NCL2 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
LRCOL1A6NCL2 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC10.12□□□□□ -0.79
LRCOL1A6NCL2 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC10.12□□□□□ -0.79
LRCOL1A6NCL2 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
LRCOL1A6NCL2 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
LRCOL1A6NCL2 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC10.12□□□□□ -0.79
LRCOL1A6NCL2 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC10.12□□□□□ -0.79
LRCOL1A6NCL2 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC10.12□□□□□ -0.79
LRCOL1A6NCL2 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
LRCOL1A6NCL2 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC10.11□□□□□ -0.79
LRCOL1A6NCL2 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC10.11□□□□□ -0.79
LRCOL1A6NCL2 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
LRCOL1A6NCL2 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC10.11□□□□□ -0.79
LRCOL1A6NCL2 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
LRCOL1A6NCL2 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC10.11□□□□□ -0.79
LRCOL1A6NCL2 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
LRCOL1A6NCL2 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
LRCOL1A6NCL2 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
LRCOL1A6NCL2 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
LRCOL1A6NCL2 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC10.11□□□□□ -0.79
LRCOL1A6NCL2 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC10.11□□□□□ -0.79
LRCOL1A6NCL2 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
LRCOL1A6NCL2 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC10.11□□□□□ -0.79
LRCOL1A6NCL2 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC10.11□□□□□ -0.79
LRCOL1A6NCL2 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
LRCOL1A6NCL2 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
LRCOL1A6NCL2 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
LRCOL1A6NCL2 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
LRCOL1A6NCL2 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
LRCOL1A6NCL2 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
LRCOL1A6NCL2 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
LRCOL1A6NCL2 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
LRCOL1A6NCL2 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms