Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CCDC162PA2VCL2 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.01□□□□□ -0.01
CCDC162PA2VCL2 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
CCDC162PA2VCL2 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC162PA2VCL2 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC162PA2VCL2 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC162PA2VCL2 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC162PA2VCL2 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC15.01□□□□□ -0.01
CCDC162PA2VCL2 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC15.01□□□□□ -0.01
CCDC162PA2VCL2 FO681548.1-201ENST00000455617 1132 ntBASIC15.01□□□□□ -0.01
CCDC162PA2VCL2 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC15.01□□□□□ -0.01
CCDC162PA2VCL2 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
CCDC162PA2VCL2 AC068587.3-201ENST00000526613 355 ntBASIC15.01□□□□□ -0.01
CCDC162PA2VCL2 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
CCDC162PA2VCL2 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC15.01□□□□□ -0.01
CCDC162PA2VCL2 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC15.01□□□□□ -0.01
CCDC162PA2VCL2 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC15.01□□□□□ -0.01
CCDC162PA2VCL2 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC162PA2VCL2 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC15.01□□□□□ -0.01
CCDC162PA2VCL2 AL596325.1-201ENST00000563991 1082 ntBASIC15.01□□□□□ -0.01
CCDC162PA2VCL2 AC145423.3-201ENST00000615987 467 ntBASIC15.01□□□□□ -0.01
CCDC162PA2VCL2 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC162PA2VCL2 AMT-204ENST00000427987 1646 ntTSL 5 BASIC15.01□□□□□ -0.01
CCDC162PA2VCL2 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC162PA2VCL2 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC15.01□□□□□ -0.01
CCDC162PA2VCL2 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC15.01□□□□□ -0.01
CCDC162PA2VCL2 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC162PA2VCL2 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC162PA2VCL2 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC15.01□□□□□ -0.01
CCDC162PA2VCL2 AC007191.1-201ENST00000623179 2995 ntBASIC15.01□□□□□ -0.01
CCDC162PA2VCL2 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC162PA2VCL2 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC15.01□□□□□ -0.01
CCDC162PA2VCL2 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
CCDC162PA2VCL2 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC162PA2VCL2 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC162PA2VCL2 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC15.01□□□□□ -0.01
CCDC162PA2VCL2 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC162PA2VCL2 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC162PA2VCL2 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC162PA2VCL2 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC15.01□□□□□ -0.01
CCDC162PA2VCL2 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC162PA2VCL2 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC15.01□□□□□ -0.01
CCDC162PA2VCL2 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CCDC162PA2VCL2 FES-203ENST00000394302 2133 ntTSL 5 BASIC15.01□□□□□ -0.01
CCDC162PA2VCL2 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
CCDC162PA2VCL2 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC162PA2VCL2 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC15□□□□□ -0.01
CCDC162PA2VCL2 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC162PA2VCL2 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
CCDC162PA2VCL2 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC162PA2VCL2 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC15□□□□□ -0.01
CCDC162PA2VCL2 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC15□□□□□ -0.01
CCDC162PA2VCL2 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC162PA2VCL2 MX1-218ENST00000619682 1980 ntTSL 5 BASIC15□□□□□ -0.01
CCDC162PA2VCL2 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC162PA2VCL2 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC15□□□□□ -0.01
CCDC162PA2VCL2 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC15□□□□□ -0.01
CCDC162PA2VCL2 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15□□□□□ -0.01
CCDC162PA2VCL2 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC162PA2VCL2 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC15□□□□□ -0.01
CCDC162PA2VCL2 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC15□□□□□ -0.01
CCDC162PA2VCL2 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC162PA2VCL2 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC15□□□□□ -0.01
CCDC162PA2VCL2 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC162PA2VCL2 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC162PA2VCL2 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC15□□□□□ -0.01
CCDC162PA2VCL2 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
CCDC162PA2VCL2 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
CCDC162PA2VCL2 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC162PA2VCL2 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
CCDC162PA2VCL2 PTPA-220ENST00000436883 532 ntTSL 4 BASIC15□□□□□ -0.01
CCDC162PA2VCL2 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
CCDC162PA2VCL2 AC011495.1-201ENST00000498085 584 ntBASIC15□□□□□ -0.01
CCDC162PA2VCL2 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
CCDC162PA2VCL2 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
CCDC162PA2VCL2 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
CCDC162PA2VCL2 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC15□□□□□ -0.01
CCDC162PA2VCL2 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC15□□□□□ -0.01
CCDC162PA2VCL2 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC15□□□□□ -0.01
CCDC162PA2VCL2 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC15□□□□□ -0.01
CCDC162PA2VCL2 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC15□□□□□ -0.01
CCDC162PA2VCL2 SRP9-204ENST00000619790 377 ntTSL 2 BASIC15□□□□□ -0.01
CCDC162PA2VCL2 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
CCDC162PA2VCL2 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC162PA2VCL2 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC162PA2VCL2 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC15□□□□□ -0.01
CCDC162PA2VCL2 AC097359.2-201ENST00000604992 2389 ntBASIC15□□□□□ -0.01
CCDC162PA2VCL2 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC162PA2VCL2 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC15□□□□□ -0.01
CCDC162PA2VCL2 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC15□□□□□ -0.01
CCDC162PA2VCL2 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC15□□□□□ -0.01
CCDC162PA2VCL2 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC15□□□□□ -0.01
CCDC162PA2VCL2 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC15□□□□□ -0.01
CCDC162PA2VCL2 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC15□□□□□ -0.01
CCDC162PA2VCL2 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
CCDC162PA2VCL2 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC162PA2VCL2 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC162PA2VCL2 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC162PA2VCL2 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC162PA2VCL2 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms