Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC14.01□□□□□ -0.17
TCRBV3S1A0A5B6 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TCRBV3S1A0A5B6 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TCRBV3S1A0A5B6 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TCRBV3S1A0A5B6 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TCRBV3S1A0A5B6 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
TCRBV3S1A0A5B6 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TCRBV3S1A0A5B6 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TCRBV3S1A0A5B6 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.01□□□□□ -0.17
TCRBV3S1A0A5B6 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC14.01□□□□□ -0.17
TCRBV3S1A0A5B6 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC14.01□□□□□ -0.17
TCRBV3S1A0A5B6 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TCRBV3S1A0A5B6 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TCRBV3S1A0A5B6 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC14.01□□□□□ -0.17
TCRBV3S1A0A5B6 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC14.01□□□□□ -0.17
TCRBV3S1A0A5B6 TSFM-210ENST00000550559 897 ntTSL 5 BASIC14.01□□□□□ -0.17
TCRBV3S1A0A5B6 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
TCRBV3S1A0A5B6 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TCRBV3S1A0A5B6 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
TCRBV3S1A0A5B6 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TCRBV3S1A0A5B6 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TCRBV3S1A0A5B6 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TCRBV3S1A0A5B6 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC14.01□□□□□ -0.17
TCRBV3S1A0A5B6 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
TCRBV3S1A0A5B6 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
TCRBV3S1A0A5B6 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC14.01□□□□□ -0.17
TCRBV3S1A0A5B6 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
TCRBV3S1A0A5B6 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC14.01□□□□□ -0.17
TCRBV3S1A0A5B6 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
TCRBV3S1A0A5B6 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TCRBV3S1A0A5B6 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
TCRBV3S1A0A5B6 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC14.01□□□□□ -0.17
TCRBV3S1A0A5B6 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC14□□□□□ -0.17
TCRBV3S1A0A5B6 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
TCRBV3S1A0A5B6 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC14□□□□□ -0.17
TCRBV3S1A0A5B6 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC14□□□□□ -0.17
TCRBV3S1A0A5B6 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
TCRBV3S1A0A5B6 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TCRBV3S1A0A5B6 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
TCRBV3S1A0A5B6 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC14□□□□□ -0.17
TCRBV3S1A0A5B6 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
TCRBV3S1A0A5B6 NCLP1-201ENST00000445357 1963 ntBASIC14□□□□□ -0.17
TCRBV3S1A0A5B6 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
TCRBV3S1A0A5B6 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
TCRBV3S1A0A5B6 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
TCRBV3S1A0A5B6 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC14□□□□□ -0.17
TCRBV3S1A0A5B6 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TCRBV3S1A0A5B6 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TCRBV3S1A0A5B6 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC14□□□□□ -0.17
TCRBV3S1A0A5B6 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
TCRBV3S1A0A5B6 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TCRBV3S1A0A5B6 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
TCRBV3S1A0A5B6 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC14□□□□□ -0.17
TCRBV3S1A0A5B6 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
TCRBV3S1A0A5B6 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
TCRBV3S1A0A5B6 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC14□□□□□ -0.17
TCRBV3S1A0A5B6 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
TCRBV3S1A0A5B6 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
TCRBV3S1A0A5B6 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
TCRBV3S1A0A5B6 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14□□□□□ -0.17
TCRBV3S1A0A5B6 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
TCRBV3S1A0A5B6 YBX2P1-201ENST00000394192 760 ntBASIC14□□□□□ -0.17
TCRBV3S1A0A5B6 RAD18-204ENST00000418463 563 ntTSL 4 BASIC14□□□□□ -0.17
TCRBV3S1A0A5B6 RAD18-205ENST00000421052 582 ntTSL 3 BASIC14□□□□□ -0.17
TCRBV3S1A0A5B6 FAM58DP-201ENST00000428076 619 ntBASIC14□□□□□ -0.17
TCRBV3S1A0A5B6 AL591424.1-201ENST00000442569 1213 ntBASIC14□□□□□ -0.17
TCRBV3S1A0A5B6 KRT18P3-201ENST00000451602 1288 ntBASIC14□□□□□ -0.17
TCRBV3S1A0A5B6 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14□□□□□ -0.17
TCRBV3S1A0A5B6 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC14□□□□□ -0.17
TCRBV3S1A0A5B6 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC14□□□□□ -0.17
TCRBV3S1A0A5B6 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14□□□□□ -0.17
TCRBV3S1A0A5B6 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC14□□□□□ -0.17
TCRBV3S1A0A5B6 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC14□□□□□ -0.17
TCRBV3S1A0A5B6 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC14□□□□□ -0.17
TCRBV3S1A0A5B6 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14□□□□□ -0.17
TCRBV3S1A0A5B6 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14□□□□□ -0.17
TCRBV3S1A0A5B6 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14□□□□□ -0.17
TCRBV3S1A0A5B6 IRF5-214ENST00000613821 595 ntTSL 5 BASIC14□□□□□ -0.17
TCRBV3S1A0A5B6 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC14□□□□□ -0.17
TCRBV3S1A0A5B6 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14□□□□□ -0.17
TCRBV3S1A0A5B6 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC14□□□□□ -0.17
TCRBV3S1A0A5B6 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
TCRBV3S1A0A5B6 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
TCRBV3S1A0A5B6 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
TCRBV3S1A0A5B6 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
TCRBV3S1A0A5B6 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
TCRBV3S1A0A5B6 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
TCRBV3S1A0A5B6 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC14□□□□□ -0.17
TCRBV3S1A0A5B6 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TCRBV3S1A0A5B6 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
TCRBV3S1A0A5B6 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
TCRBV3S1A0A5B6 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TCRBV3S1A0A5B6 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TCRBV3S1A0A5B6 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
TCRBV3S1A0A5B6 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC13.99□□□□□ -0.17
TCRBV3S1A0A5B6 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC13.99□□□□□ -0.17
TCRBV3S1A0A5B6 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TCRBV3S1A0A5B6 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
TCRBV3S1A0A5B6 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
TCRBV3S1A0A5B6 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 122 ms