Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRAV18A0A075B6X5 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TRAV18A0A075B6X5 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRAV18A0A075B6X5 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRAV18A0A075B6X5 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRAV18A0A075B6X5 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TRAV18A0A075B6X5 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRAV18A0A075B6X5 INE2-201ENST00000630399 1874 ntBASIC12.95□□□□□ -0.34
TRAV18A0A075B6X5 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRAV18A0A075B6X5 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRAV18A0A075B6X5 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRAV18A0A075B6X5 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
TRAV18A0A075B6X5 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC12.95□□□□□ -0.34
TRAV18A0A075B6X5 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRAV18A0A075B6X5 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC12.95□□□□□ -0.34
TRAV18A0A075B6X5 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRAV18A0A075B6X5 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRAV18A0A075B6X5 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
TRAV18A0A075B6X5 DGCR9-201ENST00000609630 2415 ntBASIC12.94□□□□□ -0.34
TRAV18A0A075B6X5 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC12.94□□□□□ -0.34
TRAV18A0A075B6X5 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRAV18A0A075B6X5 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
TRAV18A0A075B6X5 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TRAV18A0A075B6X5 PPT1-213ENST00000641319 2388 ntBASIC12.94□□□□□ -0.34
TRAV18A0A075B6X5 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TRAV18A0A075B6X5 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRAV18A0A075B6X5 AL121723.1-201ENST00000445194 1519 ntBASIC12.94□□□□□ -0.34
TRAV18A0A075B6X5 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
TRAV18A0A075B6X5 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC12.94□□□□□ -0.34
TRAV18A0A075B6X5 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC12.94□□□□□ -0.34
TRAV18A0A075B6X5 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
TRAV18A0A075B6X5 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRAV18A0A075B6X5 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRAV18A0A075B6X5 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRAV18A0A075B6X5 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TRAV18A0A075B6X5 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC12.94□□□□□ -0.34
TRAV18A0A075B6X5 AC015922.1-201ENST00000421102 1152 ntBASIC12.94□□□□□ -0.34
TRAV18A0A075B6X5 KRT18P43-201ENST00000469825 1281 ntBASIC12.94□□□□□ -0.34
TRAV18A0A075B6X5 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TRAV18A0A075B6X5 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC12.94□□□□□ -0.34
TRAV18A0A075B6X5 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC12.94□□□□□ -0.34
TRAV18A0A075B6X5 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRAV18A0A075B6X5 GPR39-203ENST00000622084 900 ntTSL 5 BASIC12.94□□□□□ -0.34
TRAV18A0A075B6X5 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRAV18A0A075B6X5 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TRAV18A0A075B6X5 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
TRAV18A0A075B6X5 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
TRAV18A0A075B6X5 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC12.94□□□□□ -0.34
TRAV18A0A075B6X5 Z97205.2-201ENST00000564697 1639 ntBASIC12.94□□□□□ -0.34
TRAV18A0A075B6X5 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRAV18A0A075B6X5 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
TRAV18A0A075B6X5 AC099521.3-201ENST00000624251 2938 ntBASIC12.94□□□□□ -0.34
TRAV18A0A075B6X5 AL157414.3-201ENST00000624276 1954 ntBASIC12.94□□□□□ -0.34
TRAV18A0A075B6X5 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRAV18A0A075B6X5 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRAV18A0A075B6X5 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRAV18A0A075B6X5 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC12.94□□□□□ -0.34
TRAV18A0A075B6X5 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRAV18A0A075B6X5 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRAV18A0A075B6X5 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TRAV18A0A075B6X5 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRAV18A0A075B6X5 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TRAV18A0A075B6X5 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRAV18A0A075B6X5 ZNF259P1-201ENST00000407656 1365 ntBASIC12.94□□□□□ -0.34
TRAV18A0A075B6X5 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRAV18A0A075B6X5 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAV18A0A075B6X5 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC12.93□□□□□ -0.34
TRAV18A0A075B6X5 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAV18A0A075B6X5 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
TRAV18A0A075B6X5 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC12.93□□□□□ -0.34
TRAV18A0A075B6X5 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAV18A0A075B6X5 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC12.93□□□□□ -0.34
TRAV18A0A075B6X5 AC090505.1-201ENST00000430515 1834 ntBASIC12.93□□□□□ -0.34
TRAV18A0A075B6X5 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAV18A0A075B6X5 AC012617.1-204ENST00000586340 2305 ntBASIC12.93□□□□□ -0.34
TRAV18A0A075B6X5 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAV18A0A075B6X5 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TRAV18A0A075B6X5 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAV18A0A075B6X5 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAV18A0A075B6X5 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAV18A0A075B6X5 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TRAV18A0A075B6X5 CD81-202ENST00000381036 880 ntTSL 3 BASIC12.93□□□□□ -0.34
TRAV18A0A075B6X5 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
TRAV18A0A075B6X5 AC023274.1-201ENST00000418278 595 ntBASIC12.93□□□□□ -0.34
TRAV18A0A075B6X5 MED15P5-201ENST00000423150 992 ntBASIC12.93□□□□□ -0.34
TRAV18A0A075B6X5 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC12.93□□□□□ -0.34
TRAV18A0A075B6X5 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC12.93□□□□□ -0.34
TRAV18A0A075B6X5 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
TRAV18A0A075B6X5 AL591424.1-201ENST00000442569 1213 ntBASIC12.93□□□□□ -0.34
TRAV18A0A075B6X5 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC12.93□□□□□ -0.34
TRAV18A0A075B6X5 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC12.93□□□□□ -0.34
TRAV18A0A075B6X5 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC12.93□□□□□ -0.34
TRAV18A0A075B6X5 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC12.93□□□□□ -0.34
TRAV18A0A075B6X5 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC12.93□□□□□ -0.34
TRAV18A0A075B6X5 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TRAV18A0A075B6X5 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC12.93□□□□□ -0.34
TRAV18A0A075B6X5 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC12.93□□□□□ -0.34
TRAV18A0A075B6X5 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC12.93□□□□□ -0.34
TRAV18A0A075B6X5 COX5A-206ENST00000568783 571 ntTSL 3 BASIC12.93□□□□□ -0.34
TRAV18A0A075B6X5 PRR29-209ENST00000582540 967 ntTSL 2 BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms