Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
HLA-DRB4X5D2U9 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
HLA-DRB4X5D2U9 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC11.37□□□□□ -0.59
HLA-DRB4X5D2U9 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
HLA-DRB4X5D2U9 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
HLA-DRB4X5D2U9 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
HLA-DRB4X5D2U9 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
HLA-DRB4X5D2U9 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
HLA-DRB4X5D2U9 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
HLA-DRB4X5D2U9 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC11.37□□□□□ -0.59
HLA-DRB4X5D2U9 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
HLA-DRB4X5D2U9 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
HLA-DRB4X5D2U9 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
HLA-DRB4X5D2U9 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC11.37□□□□□ -0.59
HLA-DRB4X5D2U9 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
HLA-DRB4X5D2U9 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC11.37□□□□□ -0.59
HLA-DRB4X5D2U9 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
HLA-DRB4X5D2U9 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC11.37□□□□□ -0.59
HLA-DRB4X5D2U9 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
HLA-DRB4X5D2U9 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
HLA-DRB4X5D2U9 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
HLA-DRB4X5D2U9 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
HLA-DRB4X5D2U9 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
HLA-DRB4X5D2U9 AC007787.1-201ENST00000588095 1583 ntBASIC11.37□□□□□ -0.59
HLA-DRB4X5D2U9 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC11.37□□□□□ -0.59
HLA-DRB4X5D2U9 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC11.36□□□□□ -0.59
HLA-DRB4X5D2U9 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
HLA-DRB4X5D2U9 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
HLA-DRB4X5D2U9 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
HLA-DRB4X5D2U9 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC11.36□□□□□ -0.59
HLA-DRB4X5D2U9 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
HLA-DRB4X5D2U9 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
HLA-DRB4X5D2U9 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
HLA-DRB4X5D2U9 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
HLA-DRB4X5D2U9 AC093525.8-201ENST00000624099 1342 ntBASIC11.36□□□□□ -0.59
HLA-DRB4X5D2U9 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC11.36□□□□□ -0.59
HLA-DRB4X5D2U9 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
HLA-DRB4X5D2U9 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC11.36□□□□□ -0.59
HLA-DRB4X5D2U9 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC11.36□□□□□ -0.59
HLA-DRB4X5D2U9 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
HLA-DRB4X5D2U9 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC11.36□□□□□ -0.59
HLA-DRB4X5D2U9 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC11.36□□□□□ -0.59
HLA-DRB4X5D2U9 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC11.36□□□□□ -0.59
HLA-DRB4X5D2U9 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
HLA-DRB4X5D2U9 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
HLA-DRB4X5D2U9 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
HLA-DRB4X5D2U9 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
HLA-DRB4X5D2U9 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
HLA-DRB4X5D2U9 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
HLA-DRB4X5D2U9 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
HLA-DRB4X5D2U9 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC11.36□□□□□ -0.59
HLA-DRB4X5D2U9 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
HLA-DRB4X5D2U9 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
HLA-DRB4X5D2U9 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
HLA-DRB4X5D2U9 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC11.36□□□□□ -0.59
HLA-DRB4X5D2U9 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
HLA-DRB4X5D2U9 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
HLA-DRB4X5D2U9 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
HLA-DRB4X5D2U9 TEX30-203ENST00000376022 828 ntTSL 2 BASIC11.36□□□□□ -0.59
HLA-DRB4X5D2U9 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
HLA-DRB4X5D2U9 GOLGA6L11P-201ENST00000417252 1298 ntBASIC11.36□□□□□ -0.59
HLA-DRB4X5D2U9 SOCS2P1-201ENST00000417727 557 ntBASIC11.36□□□□□ -0.59
HLA-DRB4X5D2U9 MYCLP2-201ENST00000449268 967 ntBASIC11.36□□□□□ -0.59
HLA-DRB4X5D2U9 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC11.36□□□□□ -0.59
HLA-DRB4X5D2U9 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
HLA-DRB4X5D2U9 AC140912.1-201ENST00000577171 1054 ntBASIC11.36□□□□□ -0.59
HLA-DRB4X5D2U9 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC11.36□□□□□ -0.59
HLA-DRB4X5D2U9 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC11.36□□□□□ -0.59
HLA-DRB4X5D2U9 TMEM261P1-201ENST00000604899 340 ntBASIC11.36□□□□□ -0.59
HLA-DRB4X5D2U9 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
HLA-DRB4X5D2U9 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
HLA-DRB4X5D2U9 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC11.36□□□□□ -0.59
HLA-DRB4X5D2U9 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC11.36□□□□□ -0.59
HLA-DRB4X5D2U9 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
HLA-DRB4X5D2U9 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
HLA-DRB4X5D2U9 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
HLA-DRB4X5D2U9 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC11.36□□□□□ -0.59
HLA-DRB4X5D2U9 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
HLA-DRB4X5D2U9 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC11.36□□□□□ -0.59
HLA-DRB4X5D2U9 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
HLA-DRB4X5D2U9 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC11.36□□□□□ -0.59
HLA-DRB4X5D2U9 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
HLA-DRB4X5D2U9 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
HLA-DRB4X5D2U9 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
HLA-DRB4X5D2U9 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
HLA-DRB4X5D2U9 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
HLA-DRB4X5D2U9 PCDHGB8P-201ENST00000502926 1973 ntBASIC11.36□□□□□ -0.59
HLA-DRB4X5D2U9 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
HLA-DRB4X5D2U9 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
HLA-DRB4X5D2U9 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
HLA-DRB4X5D2U9 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC11.36□□□□□ -0.59
HLA-DRB4X5D2U9 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC11.35□□□□□ -0.59
HLA-DRB4X5D2U9 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
HLA-DRB4X5D2U9 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
HLA-DRB4X5D2U9 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
HLA-DRB4X5D2U9 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
HLA-DRB4X5D2U9 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC11.35□□□□□ -0.59
HLA-DRB4X5D2U9 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
HLA-DRB4X5D2U9 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
HLA-DRB4X5D2U9 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms