Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC15.17■□□□□ 0.02
RAI2Q9Y5P3 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC15.17■□□□□ 0.02
RAI2Q9Y5P3 AC138466.3-201ENST00000619983 221 ntBASIC15.17■□□□□ 0.02
RAI2Q9Y5P3 SNX1-214ENST00000625244 324 ntTSL 5 BASIC15.17■□□□□ 0.02
RAI2Q9Y5P3 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC15.17■□□□□ 0.02
RAI2Q9Y5P3 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAI2Q9Y5P3 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAI2Q9Y5P3 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RAI2Q9Y5P3 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAI2Q9Y5P3 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAI2Q9Y5P3 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAI2Q9Y5P3 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAI2Q9Y5P3 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAI2Q9Y5P3 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC15.17■□□□□ 0.02
RAI2Q9Y5P3 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RAI2Q9Y5P3 AC018442.1-201ENST00000421439 2061 ntBASIC15.16■□□□□ 0.02
RAI2Q9Y5P3 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAI2Q9Y5P3 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAI2Q9Y5P3 CICP24-201ENST00000605464 2705 ntBASIC15.16■□□□□ 0.02
RAI2Q9Y5P3 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC15.16■□□□□ 0.02
RAI2Q9Y5P3 LINC01101-201ENST00000622953 1884 ntBASIC15.16■□□□□ 0.02
RAI2Q9Y5P3 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RAI2Q9Y5P3 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC15.16■□□□□ 0.02
RAI2Q9Y5P3 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC15.16■□□□□ 0.02
RAI2Q9Y5P3 AC018529.2-202ENST00000611482 3087 ntBASIC15.16■□□□□ 0.02
RAI2Q9Y5P3 LINC02228-204ENST00000642115 2962 ntBASIC15.16■□□□□ 0.02
RAI2Q9Y5P3 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAI2Q9Y5P3 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAI2Q9Y5P3 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAI2Q9Y5P3 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.16■□□□□ 0.02
RAI2Q9Y5P3 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
RAI2Q9Y5P3 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RAI2Q9Y5P3 AC006001.1-201ENST00000325130 474 ntBASIC15.16■□□□□ 0.02
RAI2Q9Y5P3 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RAI2Q9Y5P3 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAI2Q9Y5P3 CD8B2-202ENST00000417670 633 ntBASIC15.16■□□□□ 0.02
RAI2Q9Y5P3 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RAI2Q9Y5P3 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RAI2Q9Y5P3 FTLP10-202ENST00000505798 471 ntBASIC15.16■□□□□ 0.02
RAI2Q9Y5P3 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC15.16■□□□□ 0.02
RAI2Q9Y5P3 AHRR-211ENST00000515206 462 ntTSL 5 BASIC15.16■□□□□ 0.02
RAI2Q9Y5P3 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC15.16■□□□□ 0.02
RAI2Q9Y5P3 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC15.16■□□□□ 0.02
RAI2Q9Y5P3 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC15.16■□□□□ 0.02
RAI2Q9Y5P3 RHOXF1P1-202ENST00000635473 501 ntBASIC15.16■□□□□ 0.02
RAI2Q9Y5P3 AC006453.4-201ENST00000636949 1252 ntBASIC15.16■□□□□ 0.02
RAI2Q9Y5P3 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAI2Q9Y5P3 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAI2Q9Y5P3 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAI2Q9Y5P3 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC15.16■□□□□ 0.02
RAI2Q9Y5P3 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RAI2Q9Y5P3 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAI2Q9Y5P3 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC15.16■□□□□ 0.02
RAI2Q9Y5P3 CICP14-201ENST00000629111 2732 ntBASIC15.16■□□□□ 0.02
RAI2Q9Y5P3 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC15.15■□□□□ 0.02
RAI2Q9Y5P3 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
RAI2Q9Y5P3 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
RAI2Q9Y5P3 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAI2Q9Y5P3 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC15.15■□□□□ 0.02
RAI2Q9Y5P3 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RAI2Q9Y5P3 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC15.15■□□□□ 0.02
RAI2Q9Y5P3 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
RAI2Q9Y5P3 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.15■□□□□ 0.02
RAI2Q9Y5P3 USP35-204ENST00000530267 2419 ntTSL 2 BASIC15.15■□□□□ 0.02
RAI2Q9Y5P3 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAI2Q9Y5P3 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.15■□□□□ 0.02
RAI2Q9Y5P3 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RAI2Q9Y5P3 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RAI2Q9Y5P3 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAI2Q9Y5P3 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RAI2Q9Y5P3 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
RAI2Q9Y5P3 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
RAI2Q9Y5P3 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
RAI2Q9Y5P3 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RAI2Q9Y5P3 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
RAI2Q9Y5P3 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAI2Q9Y5P3 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RAI2Q9Y5P3 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.15■□□□□ 0.02
RAI2Q9Y5P3 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAI2Q9Y5P3 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
RAI2Q9Y5P3 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAI2Q9Y5P3 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC15.15■□□□□ 0.02
RAI2Q9Y5P3 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RAI2Q9Y5P3 AC007969.1-201ENST00000433675 447 ntBASIC15.15■□□□□ 0.02
RAI2Q9Y5P3 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RAI2Q9Y5P3 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAI2Q9Y5P3 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC15.15■□□□□ 0.02
RAI2Q9Y5P3 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC15.15■□□□□ 0.02
RAI2Q9Y5P3 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC15.15■□□□□ 0.02
RAI2Q9Y5P3 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RAI2Q9Y5P3 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC15.15■□□□□ 0.02
RAI2Q9Y5P3 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC15.15■□□□□ 0.02
RAI2Q9Y5P3 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RAI2Q9Y5P3 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAI2Q9Y5P3 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
RAI2Q9Y5P3 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAI2Q9Y5P3 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC15.15■□□□□ 0.02
RAI2Q9Y5P3 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAI2Q9Y5P3 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RAI2Q9Y5P3 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms