Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC12.32□□□□□ -0.44
RCL1Q9Y2P8 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RCL1Q9Y2P8 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
RCL1Q9Y2P8 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC12.32□□□□□ -0.44
RCL1Q9Y2P8 AL513190.1-201ENST00000621254 727 ntBASIC12.32□□□□□ -0.44
RCL1Q9Y2P8 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC12.32□□□□□ -0.44
RCL1Q9Y2P8 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
RCL1Q9Y2P8 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RCL1Q9Y2P8 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
RCL1Q9Y2P8 HADH-202ENST00000403312 1752 ntTSL 5 BASIC12.32□□□□□ -0.44
RCL1Q9Y2P8 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RCL1Q9Y2P8 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC12.32□□□□□ -0.44
RCL1Q9Y2P8 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC12.32□□□□□ -0.44
RCL1Q9Y2P8 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
RCL1Q9Y2P8 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC12.32□□□□□ -0.44
RCL1Q9Y2P8 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
RCL1Q9Y2P8 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC12.32□□□□□ -0.44
RCL1Q9Y2P8 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RCL1Q9Y2P8 AL139385.1-201ENST00000611744 3272 ntBASIC12.32□□□□□ -0.44
RCL1Q9Y2P8 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC12.32□□□□□ -0.44
RCL1Q9Y2P8 NUTM2HP-201ENST00000442076 2498 ntBASIC12.32□□□□□ -0.44
RCL1Q9Y2P8 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC12.32□□□□□ -0.44
RCL1Q9Y2P8 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
RCL1Q9Y2P8 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
RCL1Q9Y2P8 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC12.32□□□□□ -0.44
RCL1Q9Y2P8 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
RCL1Q9Y2P8 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
RCL1Q9Y2P8 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
RCL1Q9Y2P8 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
RCL1Q9Y2P8 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RCL1Q9Y2P8 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
RCL1Q9Y2P8 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC12.32□□□□□ -0.44
RCL1Q9Y2P8 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
RCL1Q9Y2P8 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
RCL1Q9Y2P8 AGGF1P1-201ENST00000509500 2073 ntBASIC12.31□□□□□ -0.44
RCL1Q9Y2P8 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
RCL1Q9Y2P8 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RCL1Q9Y2P8 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
RCL1Q9Y2P8 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
RCL1Q9Y2P8 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
RCL1Q9Y2P8 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
RCL1Q9Y2P8 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
RCL1Q9Y2P8 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RCL1Q9Y2P8 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RCL1Q9Y2P8 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
RCL1Q9Y2P8 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
RCL1Q9Y2P8 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
RCL1Q9Y2P8 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
RCL1Q9Y2P8 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC12.31□□□□□ -0.44
RCL1Q9Y2P8 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
RCL1Q9Y2P8 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC12.31□□□□□ -0.44
RCL1Q9Y2P8 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RCL1Q9Y2P8 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RCL1Q9Y2P8 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC12.31□□□□□ -0.44
RCL1Q9Y2P8 ADH5P3-201ENST00000433842 1137 ntBASIC12.31□□□□□ -0.44
RCL1Q9Y2P8 SPCS2P4-201ENST00000436160 681 ntBASIC12.31□□□□□ -0.44
RCL1Q9Y2P8 USP40-206ENST00000443711 628 ntTSL 2 BASIC12.31□□□□□ -0.44
RCL1Q9Y2P8 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC12.31□□□□□ -0.44
RCL1Q9Y2P8 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC12.31□□□□□ -0.44
RCL1Q9Y2P8 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC12.31□□□□□ -0.44
RCL1Q9Y2P8 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC12.31□□□□□ -0.44
RCL1Q9Y2P8 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC12.31□□□□□ -0.44
RCL1Q9Y2P8 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC12.31□□□□□ -0.44
RCL1Q9Y2P8 BANF1P1-201ENST00000553684 263 ntBASIC12.31□□□□□ -0.44
RCL1Q9Y2P8 AC243562.1-201ENST00000560672 389 ntBASIC12.31□□□□□ -0.44
RCL1Q9Y2P8 LINC01225-203ENST00000563550 1244 ntBASIC12.31□□□□□ -0.44
RCL1Q9Y2P8 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC12.31□□□□□ -0.44
RCL1Q9Y2P8 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
RCL1Q9Y2P8 TBCB-211ENST00000589996 724 ntTSL 3 BASIC12.31□□□□□ -0.44
RCL1Q9Y2P8 CALM3-211ENST00000598871 561 ntTSL 4 BASIC12.31□□□□□ -0.44
RCL1Q9Y2P8 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC12.31□□□□□ -0.44
RCL1Q9Y2P8 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
RCL1Q9Y2P8 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RCL1Q9Y2P8 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
RCL1Q9Y2P8 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC12.31□□□□□ -0.44
RCL1Q9Y2P8 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
RCL1Q9Y2P8 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
RCL1Q9Y2P8 SLC6A6P1-201ENST00000413933 1850 ntBASIC12.31□□□□□ -0.44
RCL1Q9Y2P8 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
RCL1Q9Y2P8 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
RCL1Q9Y2P8 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC12.31□□□□□ -0.44
RCL1Q9Y2P8 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RCL1Q9Y2P8 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
RCL1Q9Y2P8 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC12.31□□□□□ -0.44
RCL1Q9Y2P8 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RCL1Q9Y2P8 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
RCL1Q9Y2P8 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC12.31□□□□□ -0.44
RCL1Q9Y2P8 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC12.31□□□□□ -0.44
RCL1Q9Y2P8 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
RCL1Q9Y2P8 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RCL1Q9Y2P8 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
RCL1Q9Y2P8 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
RCL1Q9Y2P8 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RCL1Q9Y2P8 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC12.3□□□□□ -0.44
RCL1Q9Y2P8 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
RCL1Q9Y2P8 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC12.3□□□□□ -0.44
RCL1Q9Y2P8 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RCL1Q9Y2P8 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC12.3□□□□□ -0.44
RCL1Q9Y2P8 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
RCL1Q9Y2P8 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms