Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 AC079781.5-202ENST00000641784 3743 ntBASIC13.84□□□□□ -0.19
RPH3AQ9Y2J0 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
RPH3AQ9Y2J0 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RPH3AQ9Y2J0 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC13.84□□□□□ -0.19
RPH3AQ9Y2J0 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RPH3AQ9Y2J0 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
RPH3AQ9Y2J0 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RPH3AQ9Y2J0 TP73-213ENST00000604479 1623 ntTSL 5 BASIC13.84□□□□□ -0.19
RPH3AQ9Y2J0 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RPH3AQ9Y2J0 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC13.84□□□□□ -0.19
RPH3AQ9Y2J0 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC13.84□□□□□ -0.19
RPH3AQ9Y2J0 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC13.84□□□□□ -0.19
RPH3AQ9Y2J0 ACTBP11-201ENST00000436287 1126 ntBASIC13.84□□□□□ -0.19
RPH3AQ9Y2J0 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC13.84□□□□□ -0.19
RPH3AQ9Y2J0 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
RPH3AQ9Y2J0 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC13.84□□□□□ -0.19
RPH3AQ9Y2J0 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC13.84□□□□□ -0.19
RPH3AQ9Y2J0 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
RPH3AQ9Y2J0 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC13.84□□□□□ -0.19
RPH3AQ9Y2J0 MIR6775-201ENST00000617557 69 ntBASIC13.84□□□□□ -0.19
RPH3AQ9Y2J0 RETN-203ENST00000629642 400 ntTSL 5 BASIC13.84□□□□□ -0.19
RPH3AQ9Y2J0 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RPH3AQ9Y2J0 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RPH3AQ9Y2J0 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
RPH3AQ9Y2J0 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RPH3AQ9Y2J0 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
RPH3AQ9Y2J0 SLC9A3P3-201ENST00000457608 2229 ntBASIC13.84□□□□□ -0.19
RPH3AQ9Y2J0 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RPH3AQ9Y2J0 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
RPH3AQ9Y2J0 MECR-202ENST00000373791 2416 ntTSL 2 BASIC13.84□□□□□ -0.19
RPH3AQ9Y2J0 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RPH3AQ9Y2J0 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RPH3AQ9Y2J0 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RPH3AQ9Y2J0 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC13.84□□□□□ -0.19
RPH3AQ9Y2J0 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
RPH3AQ9Y2J0 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RPH3AQ9Y2J0 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RPH3AQ9Y2J0 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC13.84□□□□□ -0.19
RPH3AQ9Y2J0 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC13.84□□□□□ -0.19
RPH3AQ9Y2J0 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
RPH3AQ9Y2J0 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
RPH3AQ9Y2J0 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
RPH3AQ9Y2J0 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RPH3AQ9Y2J0 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC13.84□□□□□ -0.19
RPH3AQ9Y2J0 OR2I1P-210ENST00000642037 4691 ntBASIC13.84□□□□□ -0.19
RPH3AQ9Y2J0 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
RPH3AQ9Y2J0 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.19
RPH3AQ9Y2J0 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC13.83□□□□□ -0.19
RPH3AQ9Y2J0 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
RPH3AQ9Y2J0 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
RPH3AQ9Y2J0 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC13.83□□□□□ -0.19
RPH3AQ9Y2J0 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.19
RPH3AQ9Y2J0 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
RPH3AQ9Y2J0 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
RPH3AQ9Y2J0 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC13.83□□□□□ -0.19
RPH3AQ9Y2J0 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RPH3AQ9Y2J0 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.83□□□□□ -0.2
RPH3AQ9Y2J0 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.83□□□□□ -0.2
RPH3AQ9Y2J0 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC13.83□□□□□ -0.2
RPH3AQ9Y2J0 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
RPH3AQ9Y2J0 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
RPH3AQ9Y2J0 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.83□□□□□ -0.2
RPH3AQ9Y2J0 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC13.83□□□□□ -0.2
RPH3AQ9Y2J0 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC13.83□□□□□ -0.2
RPH3AQ9Y2J0 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RPH3AQ9Y2J0 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RPH3AQ9Y2J0 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13.83□□□□□ -0.2
RPH3AQ9Y2J0 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
RPH3AQ9Y2J0 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RPH3AQ9Y2J0 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC13.83□□□□□ -0.2
RPH3AQ9Y2J0 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
RPH3AQ9Y2J0 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RPH3AQ9Y2J0 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RPH3AQ9Y2J0 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RPH3AQ9Y2J0 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RPH3AQ9Y2J0 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC13.83□□□□□ -0.2
RPH3AQ9Y2J0 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RPH3AQ9Y2J0 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RPH3AQ9Y2J0 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC13.83□□□□□ -0.2
RPH3AQ9Y2J0 AC104457.1-201ENST00000401024 814 ntBASIC13.83□□□□□ -0.2
RPH3AQ9Y2J0 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
RPH3AQ9Y2J0 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RPH3AQ9Y2J0 FTH1P14-201ENST00000482930 551 ntBASIC13.83□□□□□ -0.2
RPH3AQ9Y2J0 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC13.83□□□□□ -0.2
RPH3AQ9Y2J0 APRT-204ENST00000563655 709 ntTSL 5 BASIC13.83□□□□□ -0.2
RPH3AQ9Y2J0 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
RPH3AQ9Y2J0 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RPH3AQ9Y2J0 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC13.83□□□□□ -0.2
RPH3AQ9Y2J0 AC145423.3-201ENST00000615987 467 ntBASIC13.83□□□□□ -0.2
RPH3AQ9Y2J0 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC13.83□□□□□ -0.2
RPH3AQ9Y2J0 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC13.83□□□□□ -0.2
RPH3AQ9Y2J0 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RPH3AQ9Y2J0 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RPH3AQ9Y2J0 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
RPH3AQ9Y2J0 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RPH3AQ9Y2J0 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
RPH3AQ9Y2J0 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RPH3AQ9Y2J0 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RPH3AQ9Y2J0 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RPH3AQ9Y2J0 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms