Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC21.66■■□□□ 1.06
SHANK2Q9UPX8 AC073869.2-201ENST00000417338 1026 ntBASIC21.66■■□□□ 1.06
SHANK2Q9UPX8 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC21.66■■□□□ 1.06
SHANK2Q9UPX8 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SHANK2Q9UPX8 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC21.66■■□□□ 1.06
SHANK2Q9UPX8 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC21.66■■□□□ 1.06
SHANK2Q9UPX8 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SHANK2Q9UPX8 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC21.66■■□□□ 1.06
SHANK2Q9UPX8 AC005586.2-201ENST00000563946 837 ntBASIC21.66■■□□□ 1.06
SHANK2Q9UPX8 AC021016.3-201ENST00000608367 477 ntBASIC21.66■■□□□ 1.06
SHANK2Q9UPX8 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SHANK2Q9UPX8 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
SHANK2Q9UPX8 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC21.66■■□□□ 1.06
SHANK2Q9UPX8 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SHANK2Q9UPX8 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SHANK2Q9UPX8 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC21.66■■□□□ 1.06
SHANK2Q9UPX8 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC21.66■■□□□ 1.06
SHANK2Q9UPX8 MYADML-201ENST00000474610 2147 ntBASIC21.66■■□□□ 1.06
SHANK2Q9UPX8 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC21.66■■□□□ 1.06
SHANK2Q9UPX8 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC21.66■■□□□ 1.06
SHANK2Q9UPX8 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SHANK2Q9UPX8 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SHANK2Q9UPX8 BCL2-203ENST00000589955 5011 ntBASIC21.66■■□□□ 1.06
SHANK2Q9UPX8 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
SHANK2Q9UPX8 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
SHANK2Q9UPX8 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC21.66■■□□□ 1.06
SHANK2Q9UPX8 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC21.66■■□□□ 1.06
SHANK2Q9UPX8 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SHANK2Q9UPX8 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
SHANK2Q9UPX8 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
SHANK2Q9UPX8 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SHANK2Q9UPX8 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC21.65■■□□□ 1.06
SHANK2Q9UPX8 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
SHANK2Q9UPX8 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC21.65■■□□□ 1.06
SHANK2Q9UPX8 HBB-201ENST00000335295 628 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SHANK2Q9UPX8 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SHANK2Q9UPX8 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SHANK2Q9UPX8 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SHANK2Q9UPX8 AC012362.1-201ENST00000434906 739 ntBASIC21.65■■□□□ 1.06
SHANK2Q9UPX8 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC21.65■■□□□ 1.06
SHANK2Q9UPX8 BUD31-205ENST00000456893 512 ntTSL 5 BASIC21.65■■□□□ 1.06
SHANK2Q9UPX8 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC21.65■■□□□ 1.06
SHANK2Q9UPX8 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC21.65■■□□□ 1.06
SHANK2Q9UPX8 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC21.65■■□□□ 1.06
SHANK2Q9UPX8 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
SHANK2Q9UPX8 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
SHANK2Q9UPX8 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
SHANK2Q9UPX8 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC21.65■■□□□ 1.06
SHANK2Q9UPX8 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SHANK2Q9UPX8 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
SHANK2Q9UPX8 AC090502.4-201ENST00000551714 1386 ntBASIC21.65■■□□□ 1.06
SHANK2Q9UPX8 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SHANK2Q9UPX8 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SHANK2Q9UPX8 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SHANK2Q9UPX8 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC21.65■■□□□ 1.06
SHANK2Q9UPX8 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SHANK2Q9UPX8 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
SHANK2Q9UPX8 ALG1L13P-202ENST00000519320 584 ntBASIC21.64■■□□□ 1.06
SHANK2Q9UPX8 SIGLEC22P-201ENST00000599104 714 ntBASIC21.64■■□□□ 1.06
SHANK2Q9UPX8 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC21.64■■□□□ 1.06
SHANK2Q9UPX8 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
SHANK2Q9UPX8 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC21.64■■□□□ 1.06
SHANK2Q9UPX8 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
SHANK2Q9UPX8 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC21.64■■□□□ 1.06
SHANK2Q9UPX8 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
SHANK2Q9UPX8 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
SHANK2Q9UPX8 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC21.64■■□□□ 1.06
SHANK2Q9UPX8 HTR7P1-202ENST00000624664 4411 ntBASIC21.64■■□□□ 1.05
SHANK2Q9UPX8 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC21.64■■□□□ 1.05
SHANK2Q9UPX8 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC21.64■■□□□ 1.05
SHANK2Q9UPX8 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
SHANK2Q9UPX8 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SHANK2Q9UPX8 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SHANK2Q9UPX8 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC21.64■■□□□ 1.05
SHANK2Q9UPX8 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC21.64■■□□□ 1.05
SHANK2Q9UPX8 GPI-205ENST00000586425 1799 ntTSL 5 BASIC21.64■■□□□ 1.05
SHANK2Q9UPX8 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SHANK2Q9UPX8 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SHANK2Q9UPX8 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC21.64■■□□□ 1.05
SHANK2Q9UPX8 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SHANK2Q9UPX8 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC21.64■■□□□ 1.05
SHANK2Q9UPX8 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC21.64■■□□□ 1.05
SHANK2Q9UPX8 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SHANK2Q9UPX8 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC21.64■■□□□ 1.05
SHANK2Q9UPX8 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
SHANK2Q9UPX8 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SHANK2Q9UPX8 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SHANK2Q9UPX8 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC21.64■■□□□ 1.05
SHANK2Q9UPX8 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC21.64■■□□□ 1.05
SHANK2Q9UPX8 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SHANK2Q9UPX8 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC21.64■■□□□ 1.05
SHANK2Q9UPX8 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
SHANK2Q9UPX8 AC022447.6-201ENST00000515522 438 ntBASIC21.64■■□□□ 1.05
SHANK2Q9UPX8 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC21.64■■□□□ 1.05
SHANK2Q9UPX8 AP000911.2-201ENST00000534330 502 ntBASIC21.64■■□□□ 1.05
SHANK2Q9UPX8 AC138701.2-201ENST00000553634 226 ntBASIC21.64■■□□□ 1.05
SHANK2Q9UPX8 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC21.64■■□□□ 1.05
SHANK2Q9UPX8 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC21.64■■□□□ 1.05
SHANK2Q9UPX8 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SHANK2Q9UPX8 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms