Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 RN7SL277P-201ENST00000481521 288 ntBASIC20■□□□□ 0.79
PHF8Q9UPP1 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC20■□□□□ 0.79
PHF8Q9UPP1 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC20■□□□□ 0.79
PHF8Q9UPP1 HERC2P11-201ENST00000562845 725 ntBASIC20■□□□□ 0.79
PHF8Q9UPP1 AC100756.2-201ENST00000569537 736 ntBASIC20■□□□□ 0.79
PHF8Q9UPP1 AKR1B10P2-201ENST00000577332 927 ntBASIC20■□□□□ 0.79
PHF8Q9UPP1 AP000322.3-201ENST00000608665 388 ntBASIC20■□□□□ 0.79
PHF8Q9UPP1 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PHF8Q9UPP1 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC20■□□□□ 0.79
PHF8Q9UPP1 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC20■□□□□ 0.79
PHF8Q9UPP1 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC20■□□□□ 0.79
PHF8Q9UPP1 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC20■□□□□ 0.79
PHF8Q9UPP1 SSR4P1-203ENST00000599569 2260 ntBASIC20■□□□□ 0.79
PHF8Q9UPP1 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
PHF8Q9UPP1 AP002353.1-201ENST00000528257 1599 ntBASIC20■□□□□ 0.79
PHF8Q9UPP1 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC20■□□□□ 0.79
PHF8Q9UPP1 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC20■□□□□ 0.79
PHF8Q9UPP1 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC19.99■□□□□ 0.79
PHF8Q9UPP1 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PHF8Q9UPP1 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PHF8Q9UPP1 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
PHF8Q9UPP1 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC19.99■□□□□ 0.79
PHF8Q9UPP1 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PHF8Q9UPP1 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PHF8Q9UPP1 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PHF8Q9UPP1 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
PHF8Q9UPP1 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PHF8Q9UPP1 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PHF8Q9UPP1 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC19.99■□□□□ 0.79
PHF8Q9UPP1 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC19.99■□□□□ 0.79
PHF8Q9UPP1 AC073869.2-201ENST00000417338 1026 ntBASIC19.99■□□□□ 0.79
PHF8Q9UPP1 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PHF8Q9UPP1 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC19.99■□□□□ 0.79
PHF8Q9UPP1 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC19.99■□□□□ 0.79
PHF8Q9UPP1 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PHF8Q9UPP1 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PHF8Q9UPP1 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC19.99■□□□□ 0.79
PHF8Q9UPP1 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC19.99■□□□□ 0.79
PHF8Q9UPP1 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
PHF8Q9UPP1 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PHF8Q9UPP1 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PHF8Q9UPP1 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PHF8Q9UPP1 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
PHF8Q9UPP1 AL365203.3-201ENST00000609742 2057 ntBASIC19.99■□□□□ 0.79
PHF8Q9UPP1 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PHF8Q9UPP1 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PHF8Q9UPP1 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
PHF8Q9UPP1 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
PHF8Q9UPP1 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PHF8Q9UPP1 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC19.99■□□□□ 0.79
PHF8Q9UPP1 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PHF8Q9UPP1 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PHF8Q9UPP1 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
PHF8Q9UPP1 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PHF8Q9UPP1 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PHF8Q9UPP1 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PHF8Q9UPP1 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PHF8Q9UPP1 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
PHF8Q9UPP1 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PHF8Q9UPP1 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC19.98■□□□□ 0.79
PHF8Q9UPP1 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC19.98■□□□□ 0.79
PHF8Q9UPP1 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC19.98■□□□□ 0.79
PHF8Q9UPP1 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PHF8Q9UPP1 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
PHF8Q9UPP1 JTB-202ENST00000356648 1040 ntTSL 2 BASIC19.98■□□□□ 0.79
PHF8Q9UPP1 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PHF8Q9UPP1 PSMD4P1-201ENST00000433951 1109 ntBASIC19.98■□□□□ 0.79
PHF8Q9UPP1 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC19.98■□□□□ 0.79
PHF8Q9UPP1 AREG-202ENST00000502307 956 ntTSL 5 BASIC19.98■□□□□ 0.79
PHF8Q9UPP1 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
PHF8Q9UPP1 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
PHF8Q9UPP1 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC19.98■□□□□ 0.79
PHF8Q9UPP1 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PHF8Q9UPP1 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
PHF8Q9UPP1 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PHF8Q9UPP1 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PHF8Q9UPP1 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC19.98■□□□□ 0.79
PHF8Q9UPP1 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
PHF8Q9UPP1 AC092135.3-201ENST00000624151 1846 ntBASIC19.97■□□□□ 0.79
PHF8Q9UPP1 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PHF8Q9UPP1 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PHF8Q9UPP1 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PHF8Q9UPP1 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC19.97■□□□□ 0.79
PHF8Q9UPP1 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC19.97■□□□□ 0.79
PHF8Q9UPP1 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PHF8Q9UPP1 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PHF8Q9UPP1 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PHF8Q9UPP1 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PHF8Q9UPP1 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PHF8Q9UPP1 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PHF8Q9UPP1 STK16-203ENST00000409516 895 ntTSL 2 BASIC19.97■□□□□ 0.79
PHF8Q9UPP1 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC19.97■□□□□ 0.79
PHF8Q9UPP1 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC19.97■□□□□ 0.79
PHF8Q9UPP1 AC024293.1-201ENST00000467930 498 ntBASIC19.97■□□□□ 0.79
PHF8Q9UPP1 RPL18AP8-201ENST00000486071 528 ntBASIC19.97■□□□□ 0.79
PHF8Q9UPP1 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PHF8Q9UPP1 RPS23-204ENST00000507980 836 ntTSL 2 BASIC19.97■□□□□ 0.79
PHF8Q9UPP1 CD164-210ENST00000512821 964 ntTSL 2 BASIC19.97■□□□□ 0.79
PHF8Q9UPP1 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC19.97■□□□□ 0.79
PHF8Q9UPP1 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms