Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHA4Q9UN74 CDC23-208ENST00000505120 455 ntTSL 3 BASIC17.06■□□□□ 0.32
PCDHA4Q9UN74 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC17.06■□□□□ 0.32
PCDHA4Q9UN74 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC17.06■□□□□ 0.32
PCDHA4Q9UN74 IFT20-216ENST00000588477 774 ntTSL 5 BASIC17.06■□□□□ 0.32
PCDHA4Q9UN74 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC17.06■□□□□ 0.32
PCDHA4Q9UN74 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC17.06■□□□□ 0.32
PCDHA4Q9UN74 ZACNP1-201ENST00000612259 710 ntBASIC17.06■□□□□ 0.32
PCDHA4Q9UN74 AC133552.6-201ENST00000613406 534 ntBASIC17.06■□□□□ 0.32
PCDHA4Q9UN74 AC002472.3-201ENST00000640124 621 ntBASIC17.06■□□□□ 0.32
PCDHA4Q9UN74 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC17.06■□□□□ 0.32
PCDHA4Q9UN74 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHA4Q9UN74 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHA4Q9UN74 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHA4Q9UN74 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
PCDHA4Q9UN74 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHA4Q9UN74 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHA4Q9UN74 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC17.06■□□□□ 0.32
PCDHA4Q9UN74 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
PCDHA4Q9UN74 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHA4Q9UN74 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
PCDHA4Q9UN74 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
PCDHA4Q9UN74 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHA4Q9UN74 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
PCDHA4Q9UN74 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC17.06■□□□□ 0.32
PCDHA4Q9UN74 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
PCDHA4Q9UN74 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
PCDHA4Q9UN74 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHA4Q9UN74 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHA4Q9UN74 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHA4Q9UN74 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHA4Q9UN74 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHA4Q9UN74 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHA4Q9UN74 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC17.05■□□□□ 0.32
PCDHA4Q9UN74 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC17.05■□□□□ 0.32
PCDHA4Q9UN74 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHA4Q9UN74 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHA4Q9UN74 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHA4Q9UN74 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC17.05■□□□□ 0.32
PCDHA4Q9UN74 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHA4Q9UN74 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC17.05■□□□□ 0.32
PCDHA4Q9UN74 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC17.05■□□□□ 0.32
PCDHA4Q9UN74 ATP5G2P4-201ENST00000442175 420 ntBASIC17.05■□□□□ 0.32
PCDHA4Q9UN74 KRT223P-202ENST00000449164 1292 ntBASIC17.05■□□□□ 0.32
PCDHA4Q9UN74 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC17.05■□□□□ 0.32
PCDHA4Q9UN74 PPY2P-201ENST00000582808 702 ntBASIC17.05■□□□□ 0.32
PCDHA4Q9UN74 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHA4Q9UN74 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHA4Q9UN74 AMT-204ENST00000427987 1646 ntTSL 5 BASIC17.05■□□□□ 0.32
PCDHA4Q9UN74 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
PCDHA4Q9UN74 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHA4Q9UN74 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
PCDHA4Q9UN74 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHA4Q9UN74 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHA4Q9UN74 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHA4Q9UN74 KRT8P4-201ENST00000509735 1454 ntBASIC17.05■□□□□ 0.32
PCDHA4Q9UN74 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHA4Q9UN74 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
PCDHA4Q9UN74 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC17.05■□□□□ 0.32
PCDHA4Q9UN74 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHA4Q9UN74 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHA4Q9UN74 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHA4Q9UN74 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHA4Q9UN74 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
PCDHA4Q9UN74 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
PCDHA4Q9UN74 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC17.04■□□□□ 0.32
PCDHA4Q9UN74 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHA4Q9UN74 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC17.04■□□□□ 0.32
PCDHA4Q9UN74 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC17.04■□□□□ 0.32
PCDHA4Q9UN74 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHA4Q9UN74 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHA4Q9UN74 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHA4Q9UN74 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHA4Q9UN74 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHA4Q9UN74 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHA4Q9UN74 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHA4Q9UN74 GK-202ENST00000378941 458 ntTSL 3 BASIC17.04■□□□□ 0.32
PCDHA4Q9UN74 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHA4Q9UN74 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHA4Q9UN74 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC17.04■□□□□ 0.32
PCDHA4Q9UN74 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHA4Q9UN74 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC17.04■□□□□ 0.32
PCDHA4Q9UN74 CHMP1AP1-201ENST00000445563 662 ntBASIC17.04■□□□□ 0.32
PCDHA4Q9UN74 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHA4Q9UN74 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC17.04■□□□□ 0.32
PCDHA4Q9UN74 HNRNPA1P48-202ENST00000565308 961 ntBASIC17.04■□□□□ 0.32
PCDHA4Q9UN74 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
PCDHA4Q9UN74 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC17.04■□□□□ 0.32
PCDHA4Q9UN74 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHA4Q9UN74 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC17.04■□□□□ 0.32
PCDHA4Q9UN74 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHA4Q9UN74 MPI-203ENST00000535694 1523 ntTSL 2 BASIC17.04■□□□□ 0.32
PCDHA4Q9UN74 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC17.04■□□□□ 0.32
PCDHA4Q9UN74 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHA4Q9UN74 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC17.04■□□□□ 0.32
PCDHA4Q9UN74 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC17.04■□□□□ 0.32
PCDHA4Q9UN74 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHA4Q9UN74 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC17.04■□□□□ 0.32
PCDHA4Q9UN74 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHA4Q9UN74 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms