Protein–RNA interactions for Protein: Q9UH73

EBF1, Transcription factor COE1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1Q9UH73 AC005730.2-201ENST00000564549 1184 ntBASIC15.28■□□□□ 0.04
EBF1Q9UH73 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC15.28■□□□□ 0.04
EBF1Q9UH73 SAMD11P1-201ENST00000571429 661 ntBASIC15.28■□□□□ 0.04
EBF1Q9UH73 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC15.28■□□□□ 0.04
EBF1Q9UH73 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC15.28■□□□□ 0.04
EBF1Q9UH73 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC15.28■□□□□ 0.04
EBF1Q9UH73 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
EBF1Q9UH73 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
EBF1Q9UH73 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
EBF1Q9UH73 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC15.28■□□□□ 0.04
EBF1Q9UH73 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
EBF1Q9UH73 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC15.28■□□□□ 0.04
EBF1Q9UH73 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
EBF1Q9UH73 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
EBF1Q9UH73 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
EBF1Q9UH73 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
EBF1Q9UH73 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
EBF1Q9UH73 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC15.28■□□□□ 0.04
EBF1Q9UH73 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
EBF1Q9UH73 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
EBF1Q9UH73 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
EBF1Q9UH73 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
EBF1Q9UH73 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
EBF1Q9UH73 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
EBF1Q9UH73 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC15.27■□□□□ 0.04
EBF1Q9UH73 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.04
EBF1Q9UH73 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
EBF1Q9UH73 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
EBF1Q9UH73 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC15.27■□□□□ 0.04
EBF1Q9UH73 KRT8P29-201ENST00000420409 1371 ntBASIC15.27■□□□□ 0.04
EBF1Q9UH73 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
EBF1Q9UH73 AC007292.2-201ENST00000593524 1812 ntBASIC15.27■□□□□ 0.04
EBF1Q9UH73 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC15.27■□□□□ 0.04
EBF1Q9UH73 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.27■□□□□ 0.04
EBF1Q9UH73 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
EBF1Q9UH73 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
EBF1Q9UH73 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
EBF1Q9UH73 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
EBF1Q9UH73 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
EBF1Q9UH73 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
EBF1Q9UH73 DPM3-202ENST00000368399 517 ntBASIC15.27■□□□□ 0.04
EBF1Q9UH73 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
EBF1Q9UH73 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC15.27■□□□□ 0.04
EBF1Q9UH73 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC15.27■□□□□ 0.04
EBF1Q9UH73 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC15.27■□□□□ 0.04
EBF1Q9UH73 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC15.27■□□□□ 0.04
EBF1Q9UH73 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC15.27■□□□□ 0.04
EBF1Q9UH73 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC15.27■□□□□ 0.04
EBF1Q9UH73 HIST2H2BB-201ENST00000449108 381 ntBASIC15.27■□□□□ 0.04
EBF1Q9UH73 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
EBF1Q9UH73 RPS2P36-201ENST00000456516 831 ntBASIC15.27■□□□□ 0.04
EBF1Q9UH73 OARD1-204ENST00000464633 717 ntTSL 2 BASIC15.27■□□□□ 0.04
EBF1Q9UH73 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC15.27■□□□□ 0.04
EBF1Q9UH73 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC15.27■□□□□ 0.04
EBF1Q9UH73 AL645939.5-201ENST00000606834 243 ntBASIC15.27■□□□□ 0.04
EBF1Q9UH73 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
EBF1Q9UH73 AC022748.3-201ENST00000621828 275 ntBASIC15.27■□□□□ 0.04
EBF1Q9UH73 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
EBF1Q9UH73 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC15.27■□□□□ 0.03
EBF1Q9UH73 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
EBF1Q9UH73 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
EBF1Q9UH73 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
EBF1Q9UH73 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
EBF1Q9UH73 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
EBF1Q9UH73 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
EBF1Q9UH73 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
EBF1Q9UH73 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
EBF1Q9UH73 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
EBF1Q9UH73 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
EBF1Q9UH73 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC15.27■□□□□ 0.03
EBF1Q9UH73 AC092127.1-201ENST00000567093 3455 ntBASIC15.27■□□□□ 0.03
EBF1Q9UH73 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
EBF1Q9UH73 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
EBF1Q9UH73 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
EBF1Q9UH73 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC15.27■□□□□ 0.03
EBF1Q9UH73 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
EBF1Q9UH73 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
EBF1Q9UH73 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
EBF1Q9UH73 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
EBF1Q9UH73 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
EBF1Q9UH73 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.27■□□□□ 0.03
EBF1Q9UH73 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
EBF1Q9UH73 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
EBF1Q9UH73 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
EBF1Q9UH73 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
EBF1Q9UH73 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
EBF1Q9UH73 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC15.26■□□□□ 0.03
EBF1Q9UH73 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
EBF1Q9UH73 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC15.26■□□□□ 0.03
EBF1Q9UH73 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.26■□□□□ 0.03
EBF1Q9UH73 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
EBF1Q9UH73 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
EBF1Q9UH73 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
EBF1Q9UH73 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
EBF1Q9UH73 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
EBF1Q9UH73 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
EBF1Q9UH73 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
EBF1Q9UH73 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
EBF1Q9UH73 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
EBF1Q9UH73 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms