Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.78□□□□□ -0.2
LRFN1Q9P244 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
LRFN1Q9P244 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
LRFN1Q9P244 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
LRFN1Q9P244 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LRFN1Q9P244 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LRFN1Q9P244 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LRFN1Q9P244 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LRFN1Q9P244 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
LRFN1Q9P244 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LRFN1Q9P244 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC13.78□□□□□ -0.2
LRFN1Q9P244 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LRFN1Q9P244 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LRFN1Q9P244 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
LRFN1Q9P244 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
LRFN1Q9P244 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LRFN1Q9P244 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LRFN1Q9P244 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
LRFN1Q9P244 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LRFN1Q9P244 LCK-206ENST00000373564 2137 ntTSL 5 BASIC13.77□□□□□ -0.21
LRFN1Q9P244 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LRFN1Q9P244 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
LRFN1Q9P244 AC004945.1-201ENST00000416738 983 ntBASIC13.77□□□□□ -0.21
LRFN1Q9P244 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC13.77□□□□□ -0.21
LRFN1Q9P244 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC13.77□□□□□ -0.21
LRFN1Q9P244 CHMP1AP1-201ENST00000445563 662 ntBASIC13.77□□□□□ -0.21
LRFN1Q9P244 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LRFN1Q9P244 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LRFN1Q9P244 ZNF767P-206ENST00000513792 565 ntBASIC13.77□□□□□ -0.21
LRFN1Q9P244 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC13.77□□□□□ -0.21
LRFN1Q9P244 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC13.77□□□□□ -0.21
LRFN1Q9P244 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LRFN1Q9P244 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC13.77□□□□□ -0.21
LRFN1Q9P244 AC244452.3-201ENST00000636814 210 ntBASIC13.77□□□□□ -0.21
LRFN1Q9P244 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
LRFN1Q9P244 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LRFN1Q9P244 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LRFN1Q9P244 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC13.77□□□□□ -0.21
LRFN1Q9P244 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
LRFN1Q9P244 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LRFN1Q9P244 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LRFN1Q9P244 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LRFN1Q9P244 MBP-202ENST00000355994 2772 ntTSL 5 BASIC13.77□□□□□ -0.21
LRFN1Q9P244 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
LRFN1Q9P244 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC13.77□□□□□ -0.21
LRFN1Q9P244 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LRFN1Q9P244 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LRFN1Q9P244 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LRFN1Q9P244 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LRFN1Q9P244 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC13.76□□□□□ -0.21
LRFN1Q9P244 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LRFN1Q9P244 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.76□□□□□ -0.21
LRFN1Q9P244 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC13.76□□□□□ -0.21
LRFN1Q9P244 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC13.76□□□□□ -0.21
LRFN1Q9P244 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
LRFN1Q9P244 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
LRFN1Q9P244 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LRFN1Q9P244 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LRFN1Q9P244 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
LRFN1Q9P244 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LRFN1Q9P244 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
LRFN1Q9P244 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
LRFN1Q9P244 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC13.76□□□□□ -0.21
LRFN1Q9P244 WASH3P-207ENST00000560956 1394 ntBASIC13.76□□□□□ -0.21
LRFN1Q9P244 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LRFN1Q9P244 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
LRFN1Q9P244 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LRFN1Q9P244 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LRFN1Q9P244 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
LRFN1Q9P244 HNRNPA1P63-201ENST00000427917 963 ntBASIC13.76□□□□□ -0.21
LRFN1Q9P244 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
LRFN1Q9P244 AC100850.1-201ENST00000506768 649 ntBASIC13.76□□□□□ -0.21
LRFN1Q9P244 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC13.76□□□□□ -0.21
LRFN1Q9P244 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LRFN1Q9P244 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC13.76□□□□□ -0.21
LRFN1Q9P244 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC13.76□□□□□ -0.21
LRFN1Q9P244 KLK11-210ENST00000600362 759 ntTSL 3 BASIC13.76□□□□□ -0.21
LRFN1Q9P244 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC13.76□□□□□ -0.21
LRFN1Q9P244 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC13.76□□□□□ -0.21
LRFN1Q9P244 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LRFN1Q9P244 AC068587.10-201ENST00000641210 219 ntBASIC13.76□□□□□ -0.21
LRFN1Q9P244 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LRFN1Q9P244 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
LRFN1Q9P244 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LRFN1Q9P244 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
LRFN1Q9P244 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LRFN1Q9P244 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
LRFN1Q9P244 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
LRFN1Q9P244 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13.76□□□□□ -0.21
LRFN1Q9P244 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
LRFN1Q9P244 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
LRFN1Q9P244 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC13.76□□□□□ -0.21
LRFN1Q9P244 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LRFN1Q9P244 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LRFN1Q9P244 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LRFN1Q9P244 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LRFN1Q9P244 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LRFN1Q9P244 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LRFN1Q9P244 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
LRFN1Q9P244 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms