Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 NUP210P1-202ENST00000504322 710 ntBASIC16.76■□□□□ 0.27
COL20A1Q9P218 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC16.76■□□□□ 0.27
COL20A1Q9P218 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC16.76■□□□□ 0.27
COL20A1Q9P218 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
COL20A1Q9P218 AC103988.2-201ENST00000561804 725 ntBASIC16.76■□□□□ 0.27
COL20A1Q9P218 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC16.76■□□□□ 0.27
COL20A1Q9P218 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC16.76■□□□□ 0.27
COL20A1Q9P218 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC16.76■□□□□ 0.27
COL20A1Q9P218 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC16.76■□□□□ 0.27
COL20A1Q9P218 DDX5-235ENST00000630471 473 ntTSL 4 BASIC16.76■□□□□ 0.27
COL20A1Q9P218 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
COL20A1Q9P218 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
COL20A1Q9P218 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
COL20A1Q9P218 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC16.76■□□□□ 0.27
COL20A1Q9P218 MX1-218ENST00000619682 1980 ntTSL 5 BASIC16.76■□□□□ 0.27
COL20A1Q9P218 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
COL20A1Q9P218 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
COL20A1Q9P218 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
COL20A1Q9P218 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
COL20A1Q9P218 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
COL20A1Q9P218 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
COL20A1Q9P218 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
COL20A1Q9P218 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.76■□□□□ 0.27
COL20A1Q9P218 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC16.76■□□□□ 0.27
COL20A1Q9P218 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC16.76■□□□□ 0.27
COL20A1Q9P218 POR-201ENST00000394893 2532 ntTSL 5 BASIC16.75■□□□□ 0.27
COL20A1Q9P218 AL157791.1-201ENST00000553667 1699 ntBASIC16.75■□□□□ 0.27
COL20A1Q9P218 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC16.75■□□□□ 0.27
COL20A1Q9P218 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
COL20A1Q9P218 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
COL20A1Q9P218 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC16.75■□□□□ 0.27
COL20A1Q9P218 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
COL20A1Q9P218 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
COL20A1Q9P218 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
COL20A1Q9P218 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
COL20A1Q9P218 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
COL20A1Q9P218 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
COL20A1Q9P218 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
COL20A1Q9P218 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
COL20A1Q9P218 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC16.75■□□□□ 0.27
COL20A1Q9P218 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
COL20A1Q9P218 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
COL20A1Q9P218 AC091046.1-201ENST00000331871 207 ntBASIC16.75■□□□□ 0.27
COL20A1Q9P218 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
COL20A1Q9P218 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
COL20A1Q9P218 HNRNPA1P27-201ENST00000412087 955 ntBASIC16.75■□□□□ 0.27
COL20A1Q9P218 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC16.75■□□□□ 0.27
COL20A1Q9P218 AL008707.1-201ENST00000422498 534 ntBASIC16.75■□□□□ 0.27
COL20A1Q9P218 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC16.75■□□□□ 0.27
COL20A1Q9P218 MSRA-203ENST00000441698 788 ntTSL 2 BASIC16.75■□□□□ 0.27
COL20A1Q9P218 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
COL20A1Q9P218 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
COL20A1Q9P218 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC16.75■□□□□ 0.27
COL20A1Q9P218 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC16.75■□□□□ 0.27
COL20A1Q9P218 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC16.75■□□□□ 0.27
COL20A1Q9P218 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC16.75■□□□□ 0.27
COL20A1Q9P218 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC16.75■□□□□ 0.27
COL20A1Q9P218 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC16.75■□□□□ 0.27
COL20A1Q9P218 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC16.75■□□□□ 0.27
COL20A1Q9P218 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC16.75■□□□□ 0.27
COL20A1Q9P218 CU633904.3-201ENST00000624042 1029 ntBASIC16.75■□□□□ 0.27
COL20A1Q9P218 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
COL20A1Q9P218 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
COL20A1Q9P218 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
COL20A1Q9P218 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
COL20A1Q9P218 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
COL20A1Q9P218 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
COL20A1Q9P218 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.75■□□□□ 0.27
COL20A1Q9P218 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
COL20A1Q9P218 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
COL20A1Q9P218 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
COL20A1Q9P218 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC16.75■□□□□ 0.27
COL20A1Q9P218 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
COL20A1Q9P218 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC16.75■□□□□ 0.27
COL20A1Q9P218 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
COL20A1Q9P218 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
COL20A1Q9P218 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
COL20A1Q9P218 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
COL20A1Q9P218 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
COL20A1Q9P218 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
COL20A1Q9P218 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
COL20A1Q9P218 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
COL20A1Q9P218 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC16.74■□□□□ 0.27
COL20A1Q9P218 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
COL20A1Q9P218 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
COL20A1Q9P218 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
COL20A1Q9P218 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
COL20A1Q9P218 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
COL20A1Q9P218 AC139712.1-201ENST00000378256 1875 ntBASIC16.74■□□□□ 0.27
COL20A1Q9P218 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
COL20A1Q9P218 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
COL20A1Q9P218 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
COL20A1Q9P218 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
COL20A1Q9P218 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
COL20A1Q9P218 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
COL20A1Q9P218 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC16.74■□□□□ 0.27
COL20A1Q9P218 ISCA2P1-201ENST00000425548 448 ntBASIC16.74■□□□□ 0.27
COL20A1Q9P218 AC078875.1-201ENST00000431907 724 ntBASIC16.74■□□□□ 0.27
COL20A1Q9P218 PTPA-215ENST00000432124 567 ntTSL 4 BASIC16.74■□□□□ 0.27
COL20A1Q9P218 Z97180.1-201ENST00000445173 988 ntBASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms