Protein–RNA interactions for Protein: Q9NXP7

GIN1, Gypsy retrotransposon integrase-like protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GIN1Q9NXP7 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
GIN1Q9NXP7 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
GIN1Q9NXP7 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
GIN1Q9NXP7 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
GIN1Q9NXP7 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
GIN1Q9NXP7 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
GIN1Q9NXP7 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
GIN1Q9NXP7 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
GIN1Q9NXP7 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
GIN1Q9NXP7 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
GIN1Q9NXP7 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
GIN1Q9NXP7 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
GIN1Q9NXP7 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC14.33□□□□□ -0.12
GIN1Q9NXP7 HNRNPA1P40-201ENST00000426371 1278 ntBASIC14.33□□□□□ -0.12
GIN1Q9NXP7 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC14.33□□□□□ -0.12
GIN1Q9NXP7 DOC2GP-202ENST00000514950 1163 ntBASIC14.33□□□□□ -0.12
GIN1Q9NXP7 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC14.33□□□□□ -0.12
GIN1Q9NXP7 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14.33□□□□□ -0.12
GIN1Q9NXP7 AC036164.1-201ENST00000570544 333 ntBASIC14.33□□□□□ -0.12
GIN1Q9NXP7 NAA60-208ENST00000570819 833 ntTSL 2 BASIC14.33□□□□□ -0.12
GIN1Q9NXP7 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
GIN1Q9NXP7 RNA5-8SN1-201ENST00000610460 153 ntBASIC14.33□□□□□ -0.12
GIN1Q9NXP7 RNA5-8SN5-202ENST00000612463 153 ntBASIC14.33□□□□□ -0.12
GIN1Q9NXP7 AC004790.1-201ENST00000612686 536 ntBASIC14.33□□□□□ -0.12
GIN1Q9NXP7 RNA5-8SN4-201ENST00000613359 153 ntBASIC14.33□□□□□ -0.12
GIN1Q9NXP7 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC14.33□□□□□ -0.12
GIN1Q9NXP7 RNA5-8SN5-201ENST00000619471 153 ntBASIC14.33□□□□□ -0.12
GIN1Q9NXP7 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC14.33□□□□□ -0.12
GIN1Q9NXP7 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.33□□□□□ -0.12
GIN1Q9NXP7 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.33□□□□□ -0.12
GIN1Q9NXP7 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
GIN1Q9NXP7 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
GIN1Q9NXP7 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
GIN1Q9NXP7 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC14.33□□□□□ -0.12
GIN1Q9NXP7 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
GIN1Q9NXP7 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14.33□□□□□ -0.12
GIN1Q9NXP7 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
GIN1Q9NXP7 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
GIN1Q9NXP7 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
GIN1Q9NXP7 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
GIN1Q9NXP7 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC14.33□□□□□ -0.12
GIN1Q9NXP7 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
GIN1Q9NXP7 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
GIN1Q9NXP7 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.33□□□□□ -0.12
GIN1Q9NXP7 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
GIN1Q9NXP7 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
GIN1Q9NXP7 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC14.33□□□□□ -0.12
GIN1Q9NXP7 REXO1L4P-201ENST00000605109 1937 ntBASIC14.33□□□□□ -0.12
GIN1Q9NXP7 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
GIN1Q9NXP7 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
GIN1Q9NXP7 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
GIN1Q9NXP7 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
GIN1Q9NXP7 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GIN1Q9NXP7 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
GIN1Q9NXP7 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GIN1Q9NXP7 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GIN1Q9NXP7 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.32□□□□□ -0.12
GIN1Q9NXP7 AC005562.1-201ENST00000583030 3219 ntBASIC14.32□□□□□ -0.12
GIN1Q9NXP7 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
GIN1Q9NXP7 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
GIN1Q9NXP7 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
GIN1Q9NXP7 AL928921.2-201ENST00000641325 2442 ntBASIC14.32□□□□□ -0.12
GIN1Q9NXP7 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GIN1Q9NXP7 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GIN1Q9NXP7 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
GIN1Q9NXP7 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
GIN1Q9NXP7 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
GIN1Q9NXP7 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC14.32□□□□□ -0.12
GIN1Q9NXP7 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
GIN1Q9NXP7 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GIN1Q9NXP7 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
GIN1Q9NXP7 TMPRSS11CP-201ENST00000453277 683 ntBASIC14.32□□□□□ -0.12
GIN1Q9NXP7 RPL13AP25-201ENST00000484130 612 ntBASIC14.32□□□□□ -0.12
GIN1Q9NXP7 AC004066.1-201ENST00000502488 802 ntBASIC14.32□□□□□ -0.12
GIN1Q9NXP7 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC14.32□□□□□ -0.12
GIN1Q9NXP7 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC14.32□□□□□ -0.12
GIN1Q9NXP7 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
GIN1Q9NXP7 GPX4-206ENST00000588919 803 ntTSL 2 BASIC14.32□□□□□ -0.12
GIN1Q9NXP7 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC14.32□□□□□ -0.12
GIN1Q9NXP7 AC099568.2-201ENST00000609194 695 ntBASIC14.32□□□□□ -0.12
GIN1Q9NXP7 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
GIN1Q9NXP7 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
GIN1Q9NXP7 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GIN1Q9NXP7 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GIN1Q9NXP7 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GIN1Q9NXP7 AC138969.2-201ENST00000532739 9932 ntBASIC14.32□□□□□ -0.12
GIN1Q9NXP7 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
GIN1Q9NXP7 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GIN1Q9NXP7 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14.32□□□□□ -0.12
GIN1Q9NXP7 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
GIN1Q9NXP7 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.32□□□□□ -0.12
GIN1Q9NXP7 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
GIN1Q9NXP7 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC14.32□□□□□ -0.12
GIN1Q9NXP7 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GIN1Q9NXP7 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GIN1Q9NXP7 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GIN1Q9NXP7 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
GIN1Q9NXP7 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GIN1Q9NXP7 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
GIN1Q9NXP7 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms