Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.24
BLOC1S4Q9NUP1 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC16.58■□□□□ 0.24
BLOC1S4Q9NUP1 RN7SL713P-201ENST00000582127 302 ntBASIC16.58■□□□□ 0.24
BLOC1S4Q9NUP1 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC16.58■□□□□ 0.24
BLOC1S4Q9NUP1 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
BLOC1S4Q9NUP1 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.58■□□□□ 0.24
BLOC1S4Q9NUP1 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
BLOC1S4Q9NUP1 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
BLOC1S4Q9NUP1 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
BLOC1S4Q9NUP1 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC16.58■□□□□ 0.24
BLOC1S4Q9NUP1 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
BLOC1S4Q9NUP1 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
BLOC1S4Q9NUP1 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
BLOC1S4Q9NUP1 AC006504.5-208ENST00000588784 2401 ntBASIC16.58■□□□□ 0.24
BLOC1S4Q9NUP1 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
BLOC1S4Q9NUP1 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
BLOC1S4Q9NUP1 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
BLOC1S4Q9NUP1 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
BLOC1S4Q9NUP1 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
BLOC1S4Q9NUP1 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
BLOC1S4Q9NUP1 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
BLOC1S4Q9NUP1 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
BLOC1S4Q9NUP1 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
BLOC1S4Q9NUP1 AL590440.2-201ENST00000641973 1595 ntBASIC16.57■□□□□ 0.24
BLOC1S4Q9NUP1 AL354989.2-201ENST00000435838 1540 ntBASIC16.57■□□□□ 0.24
BLOC1S4Q9NUP1 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
BLOC1S4Q9NUP1 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC16.57■□□□□ 0.24
BLOC1S4Q9NUP1 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
BLOC1S4Q9NUP1 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
BLOC1S4Q9NUP1 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
BLOC1S4Q9NUP1 SNX21-203ENST00000372541 771 ntTSL 2 BASIC16.57■□□□□ 0.24
BLOC1S4Q9NUP1 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC16.57■□□□□ 0.24
BLOC1S4Q9NUP1 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
BLOC1S4Q9NUP1 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC16.57■□□□□ 0.24
BLOC1S4Q9NUP1 RGS5-214ENST00000429865 754 ntTSL 3 BASIC16.57■□□□□ 0.24
BLOC1S4Q9NUP1 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC16.57■□□□□ 0.24
BLOC1S4Q9NUP1 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
BLOC1S4Q9NUP1 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
BLOC1S4Q9NUP1 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC16.57■□□□□ 0.24
BLOC1S4Q9NUP1 COX5BP1-201ENST00000507622 393 ntBASIC16.57■□□□□ 0.24
BLOC1S4Q9NUP1 AHRR-211ENST00000515206 462 ntTSL 5 BASIC16.57■□□□□ 0.24
BLOC1S4Q9NUP1 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC16.57■□□□□ 0.24
BLOC1S4Q9NUP1 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC16.57■□□□□ 0.24
BLOC1S4Q9NUP1 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
BLOC1S4Q9NUP1 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
BLOC1S4Q9NUP1 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
BLOC1S4Q9NUP1 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
BLOC1S4Q9NUP1 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
BLOC1S4Q9NUP1 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
BLOC1S4Q9NUP1 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
BLOC1S4Q9NUP1 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
BLOC1S4Q9NUP1 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
BLOC1S4Q9NUP1 MYADML-201ENST00000474610 2147 ntBASIC16.57■□□□□ 0.24
BLOC1S4Q9NUP1 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
BLOC1S4Q9NUP1 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
BLOC1S4Q9NUP1 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
BLOC1S4Q9NUP1 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
BLOC1S4Q9NUP1 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
BLOC1S4Q9NUP1 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
BLOC1S4Q9NUP1 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC16.56■□□□□ 0.24
BLOC1S4Q9NUP1 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
BLOC1S4Q9NUP1 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
BLOC1S4Q9NUP1 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
BLOC1S4Q9NUP1 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
BLOC1S4Q9NUP1 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
BLOC1S4Q9NUP1 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
BLOC1S4Q9NUP1 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
BLOC1S4Q9NUP1 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
BLOC1S4Q9NUP1 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
BLOC1S4Q9NUP1 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
BLOC1S4Q9NUP1 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
BLOC1S4Q9NUP1 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC16.56■□□□□ 0.24
BLOC1S4Q9NUP1 AC063926.2-201ENST00000623766 1308 ntBASIC16.56■□□□□ 0.24
BLOC1S4Q9NUP1 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC16.56■□□□□ 0.24
BLOC1S4Q9NUP1 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
BLOC1S4Q9NUP1 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
BLOC1S4Q9NUP1 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
BLOC1S4Q9NUP1 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC16.56■□□□□ 0.24
BLOC1S4Q9NUP1 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
BLOC1S4Q9NUP1 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
BLOC1S4Q9NUP1 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
BLOC1S4Q9NUP1 MIR1909-201ENST00000411312 80 ntBASIC16.56■□□□□ 0.24
BLOC1S4Q9NUP1 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC16.56■□□□□ 0.24
BLOC1S4Q9NUP1 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC16.56■□□□□ 0.24
BLOC1S4Q9NUP1 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
BLOC1S4Q9NUP1 CTBP2P5-201ENST00000454986 1264 ntBASIC16.56■□□□□ 0.24
BLOC1S4Q9NUP1 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
BLOC1S4Q9NUP1 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC16.56■□□□□ 0.24
BLOC1S4Q9NUP1 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC16.56■□□□□ 0.24
BLOC1S4Q9NUP1 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
BLOC1S4Q9NUP1 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
BLOC1S4Q9NUP1 AL358472.3-201ENST00000608147 415 ntBASIC16.56■□□□□ 0.24
BLOC1S4Q9NUP1 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC16.56■□□□□ 0.24
BLOC1S4Q9NUP1 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC16.56■□□□□ 0.24
BLOC1S4Q9NUP1 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
BLOC1S4Q9NUP1 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC16.56■□□□□ 0.24
BLOC1S4Q9NUP1 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
BLOC1S4Q9NUP1 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
BLOC1S4Q9NUP1 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC16.56■□□□□ 0.24
BLOC1S4Q9NUP1 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms