Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC7.46□□□□□ -1.21
CDC42SE1Q9NRR8 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.21
CDC42SE1Q9NRR8 SLIT2-202ENST00000503823 5233 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
CDC42SE1Q9NRR8 NMNAT2-202ENST00000294868 5448 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
CDC42SE1Q9NRR8 VPS16-202ENST00000380445 2750 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
CDC42SE1Q9NRR8 C8orf17-202ENST00000625034 2775 ntBASIC7.46□□□□□ -1.21
CDC42SE1Q9NRR8 SYNPO2L-201ENST00000372873 4121 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
CDC42SE1Q9NRR8 ZNF789-209ENST00000483089 2994 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
CDC42SE1Q9NRR8 LINC01913-201ENST00000398796 1810 ntTSL 2 BASIC7.46□□□□□ -1.21
CDC42SE1Q9NRR8 ABL2-207ENST00000507173 3177 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.22
CDC42SE1Q9NRR8 ATF3-202ENST00000341491 2033 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
CDC42SE1Q9NRR8 ATIC-201ENST00000236959 2213 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
CDC42SE1Q9NRR8 DDI1-201ENST00000302259 2609 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
CDC42SE1Q9NRR8 APEH-201ENST00000296456 3220 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
CDC42SE1Q9NRR8 PML-207ENST00000435786 3643 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.22
CDC42SE1Q9NRR8 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
CDC42SE1Q9NRR8 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
CDC42SE1Q9NRR8 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
CDC42SE1Q9NRR8 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC7.46□□□□□ -1.22
CDC42SE1Q9NRR8 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
CDC42SE1Q9NRR8 HLA-F-220ENST00000434407 884 ntBASIC7.46□□□□□ -1.22
CDC42SE1Q9NRR8 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
CDC42SE1Q9NRR8 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC7.46□□□□□ -1.22
CDC42SE1Q9NRR8 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC7.46□□□□□ -1.22
CDC42SE1Q9NRR8 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC7.46□□□□□ -1.22
CDC42SE1Q9NRR8 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC7.46□□□□□ -1.22
CDC42SE1Q9NRR8 TRIR-202ENST00000588213 841 ntTSL 3 BASIC7.46□□□□□ -1.22
CDC42SE1Q9NRR8 AC011495.2-201ENST00000600665 360 ntTSL 5 BASIC7.46□□□□□ -1.22
CDC42SE1Q9NRR8 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
CDC42SE1Q9NRR8 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC7.46□□□□□ -1.22
CDC42SE1Q9NRR8 RBM15-201ENST00000369784 4244 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
CDC42SE1Q9NRR8 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC7.46□□□□□ -1.22
CDC42SE1Q9NRR8 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC7.46□□□□□ -1.22
CDC42SE1Q9NRR8 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
CDC42SE1Q9NRR8 FAIM2-205ENST00000550890 2094 ntTSL 2 BASIC7.46□□□□□ -1.22
CDC42SE1Q9NRR8 LAS1L-201ENST00000374804 2261 ntTSL 2 BASIC7.46□□□□□ -1.22
CDC42SE1Q9NRR8 MAP2K6-206ENST00000590474 2870 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
CDC42SE1Q9NRR8 GNG11-201ENST00000248564 3055 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
CDC42SE1Q9NRR8 ABCC5-201ENST00000265586 5712 ntTSL 5 BASIC7.46□□□□□ -1.22
CDC42SE1Q9NRR8 TOMM40L-202ENST00000367988 2708 ntAPPRIS P1 TSL 2 BASIC7.46□□□□□ -1.22
CDC42SE1Q9NRR8 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.22
CDC42SE1Q9NRR8 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
CDC42SE1Q9NRR8 SLC12A3-202ENST00000438926 5567 ntAPPRIS P3 TSL 1 (best) BASIC7.46□□□□□ -1.22
CDC42SE1Q9NRR8 ITGA4-203ENST00000397033 4189 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
CDC42SE1Q9NRR8 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC7.46□□□□□ -1.22
CDC42SE1Q9NRR8 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
CDC42SE1Q9NRR8 CAMSAP2-202ENST00000358823 7352 ntAPPRIS P3 TSL 5 BASIC7.46□□□□□ -1.22
CDC42SE1Q9NRR8 KLK10-203ENST00000391805 3006 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
CDC42SE1Q9NRR8 RASAL1-203ENST00000446861 3040 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.22
CDC42SE1Q9NRR8 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC7.46□□□□□ -1.22
CDC42SE1Q9NRR8 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC7.46□□□□□ -1.22
CDC42SE1Q9NRR8 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC7.46□□□□□ -1.22
CDC42SE1Q9NRR8 AC015909.3-201ENST00000572855 1794 ntBASIC7.46□□□□□ -1.22
CDC42SE1Q9NRR8 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC7.46□□□□□ -1.22
CDC42SE1Q9NRR8 PEG3-202ENST00000593695 4741 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
CDC42SE1Q9NRR8 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC7.46□□□□□ -1.22
CDC42SE1Q9NRR8 HGNC:18790-209ENST00000513555 3291 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
CDC42SE1Q9NRR8 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
CDC42SE1Q9NRR8 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
CDC42SE1Q9NRR8 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC7.46□□□□□ -1.22
CDC42SE1Q9NRR8 ADGRE5-202ENST00000357355 3054 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
CDC42SE1Q9NRR8 MYADM-204ENST00000391770 3056 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
CDC42SE1Q9NRR8 CACNB1-212ENST00000622445 3722 ntTSL 5 BASIC7.45□□□□□ -1.22
CDC42SE1Q9NRR8 CRP-201ENST00000255030 2015 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
CDC42SE1Q9NRR8 TRIM31-210ENST00000376734 2043 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
CDC42SE1Q9NRR8 HMGCS1-201ENST00000325110 3506 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
CDC42SE1Q9NRR8 SLC9A8-202ENST00000417961 6309 ntTSL 2 BASIC7.45□□□□□ -1.22
CDC42SE1Q9NRR8 GOLGA1-202ENST00000373555 4811 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
CDC42SE1Q9NRR8 LOXHD1-204ENST00000398705 1824 ntTSL 2 BASIC7.45□□□□□ -1.22
CDC42SE1Q9NRR8 M1AP-202ENST00000409585 2457 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
CDC42SE1Q9NRR8 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
CDC42SE1Q9NRR8 ZMYND11-201ENST00000309776 4228 ntTSL 2 BASIC7.45□□□□□ -1.22
CDC42SE1Q9NRR8 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC7.45□□□□□ -1.22
CDC42SE1Q9NRR8 GUCD1-213ENST00000621833 3584 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
CDC42SE1Q9NRR8 C1GALT1-205ENST00000436587 6235 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
CDC42SE1Q9NRR8 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
CDC42SE1Q9NRR8 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC7.45□□□□□ -1.22
CDC42SE1Q9NRR8 SIGLEC16-201ENST00000599858 1437 ntBASIC7.45□□□□□ -1.22
CDC42SE1Q9NRR8 CNBD2-204ENST00000489667 2531 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
CDC42SE1Q9NRR8 GRHL3-201ENST00000236255 1870 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
CDC42SE1Q9NRR8 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
CDC42SE1Q9NRR8 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
CDC42SE1Q9NRR8 MAT2B-204ENST00000518095 3409 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
CDC42SE1Q9NRR8 ZFHX2-AS1-201ENST00000553985 2322 ntTSL 2 BASIC7.45□□□□□ -1.22
CDC42SE1Q9NRR8 AC012617.1-204ENST00000586340 2305 ntBASIC7.45□□□□□ -1.22
CDC42SE1Q9NRR8 ZNF774-201ENST00000354377 3202 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
CDC42SE1Q9NRR8 GRIK1-206ENST00000399913 3234 ntTSL 2 BASIC7.45□□□□□ -1.22
CDC42SE1Q9NRR8 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC7.45□□□□□ -1.22
CDC42SE1Q9NRR8 AC005865.1-201ENST00000432994 3004 ntTSL 2 BASIC7.45□□□□□ -1.22
CDC42SE1Q9NRR8 SLC16A2-201ENST00000587091 4161 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
CDC42SE1Q9NRR8 TMEM107-208ENST00000532998 2358 ntTSL 2 BASIC7.45□□□□□ -1.22
CDC42SE1Q9NRR8 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC7.45□□□□□ -1.22
CDC42SE1Q9NRR8 ATP6V0A4-203ENST00000393054 3090 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
CDC42SE1Q9NRR8 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
CDC42SE1Q9NRR8 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC7.45□□□□□ -1.22
CDC42SE1Q9NRR8 MASP1-201ENST00000169293 2440 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
CDC42SE1Q9NRR8 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC7.45□□□□□ -1.22
CDC42SE1Q9NRR8 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
CDC42SE1Q9NRR8 KRT18P60-201ENST00000312876 1297 ntBASIC7.45□□□□□ -1.22
CDC42SE1Q9NRR8 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms