Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC9.7□□□□□ -0.86
KRTAP3-3Q9BYR6 ARMC4P1-201ENST00000438905 707 ntBASIC9.7□□□□□ -0.86
KRTAP3-3Q9BYR6 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC9.7□□□□□ -0.86
KRTAP3-3Q9BYR6 LINC01647-201ENST00000453135 1285 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
KRTAP3-3Q9BYR6 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC9.7□□□□□ -0.86
KRTAP3-3Q9BYR6 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC9.7□□□□□ -0.86
KRTAP3-3Q9BYR6 RPS29P25-201ENST00000481709 171 ntBASIC9.7□□□□□ -0.86
KRTAP3-3Q9BYR6 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC9.7□□□□□ -0.86
KRTAP3-3Q9BYR6 AC034245.1-201ENST00000504349 1227 ntTSL 5 BASIC9.7□□□□□ -0.86
KRTAP3-3Q9BYR6 OR10J8P-201ENST00000504659 929 ntBASIC9.7□□□□□ -0.86
KRTAP3-3Q9BYR6 AC099343.1-201ENST00000513481 609 ntBASIC9.7□□□□□ -0.86
KRTAP3-3Q9BYR6 AC084026.1-201ENST00000522028 564 ntTSL 4 BASIC9.7□□□□□ -0.86
KRTAP3-3Q9BYR6 AC023644.1-201ENST00000523380 859 ntTSL 5 BASIC9.7□□□□□ -0.86
KRTAP3-3Q9BYR6 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC9.7□□□□□ -0.86
KRTAP3-3Q9BYR6 C11orf58-209ENST00000528634 776 ntTSL 5 BASIC9.7□□□□□ -0.86
KRTAP3-3Q9BYR6 NXPE2P1-201ENST00000543705 726 ntBASIC9.7□□□□□ -0.86
KRTAP3-3Q9BYR6 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
KRTAP3-3Q9BYR6 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC9.7□□□□□ -0.86
KRTAP3-3Q9BYR6 TTN-AS1-215ENST00000585451 949 ntTSL 5 BASIC9.7□□□□□ -0.86
KRTAP3-3Q9BYR6 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC9.7□□□□□ -0.86
KRTAP3-3Q9BYR6 MIR663AHG-208ENST00000596058 665 ntTSL 5 BASIC9.7□□□□□ -0.86
KRTAP3-3Q9BYR6 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC9.7□□□□□ -0.86
KRTAP3-3Q9BYR6 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC9.7□□□□□ -0.86
KRTAP3-3Q9BYR6 AC004853.1-201ENST00000604902 698 ntBASIC9.7□□□□□ -0.86
KRTAP3-3Q9BYR6 SP2-202ENST00000613139 908 ntTSL 5 BASIC9.7□□□□□ -0.86
KRTAP3-3Q9BYR6 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
KRTAP3-3Q9BYR6 OR1S1-201ENST00000624470 978 ntBASIC9.7□□□□□ -0.86
KRTAP3-3Q9BYR6 AL589666.2-201ENST00000624603 618 ntBASIC9.7□□□□□ -0.86
KRTAP3-3Q9BYR6 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
KRTAP3-3Q9BYR6 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC9.7□□□□□ -0.86
KRTAP3-3Q9BYR6 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
KRTAP3-3Q9BYR6 AC109780.1-201ENST00000451768 1344 ntBASIC9.7□□□□□ -0.86
KRTAP3-3Q9BYR6 AQP9-203ENST00000558772 1334 ntTSL 2 BASIC9.7□□□□□ -0.86
KRTAP3-3Q9BYR6 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC9.7□□□□□ -0.86
KRTAP3-3Q9BYR6 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
KRTAP3-3Q9BYR6 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
KRTAP3-3Q9BYR6 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
KRTAP3-3Q9BYR6 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
KRTAP3-3Q9BYR6 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC9.7□□□□□ -0.86
KRTAP3-3Q9BYR6 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
KRTAP3-3Q9BYR6 ANXA13-201ENST00000262219 1588 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
KRTAP3-3Q9BYR6 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC9.7□□□□□ -0.86
KRTAP3-3Q9BYR6 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC9.7□□□□□ -0.86
KRTAP3-3Q9BYR6 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
KRTAP3-3Q9BYR6 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
KRTAP3-3Q9BYR6 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC9.7□□□□□ -0.86
KRTAP3-3Q9BYR6 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC9.7□□□□□ -0.86
KRTAP3-3Q9BYR6 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC9.7□□□□□ -0.86
KRTAP3-3Q9BYR6 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
KRTAP3-3Q9BYR6 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC9.7□□□□□ -0.86
KRTAP3-3Q9BYR6 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
KRTAP3-3Q9BYR6 MS4A7-201ENST00000300184 1869 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
KRTAP3-3Q9BYR6 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
KRTAP3-3Q9BYR6 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC9.7□□□□□ -0.86
KRTAP3-3Q9BYR6 LINC01465-201ENST00000408887 1940 ntBASIC9.7□□□□□ -0.86
KRTAP3-3Q9BYR6 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
KRTAP3-3Q9BYR6 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
KRTAP3-3Q9BYR6 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
KRTAP3-3Q9BYR6 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
KRTAP3-3Q9BYR6 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC9.69□□□□□ -0.86
KRTAP3-3Q9BYR6 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
KRTAP3-3Q9BYR6 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
KRTAP3-3Q9BYR6 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC9.69□□□□□ -0.86
KRTAP3-3Q9BYR6 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
KRTAP3-3Q9BYR6 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
KRTAP3-3Q9BYR6 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
KRTAP3-3Q9BYR6 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
KRTAP3-3Q9BYR6 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
KRTAP3-3Q9BYR6 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
KRTAP3-3Q9BYR6 ABCD3-201ENST00000315713 884 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
KRTAP3-3Q9BYR6 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
KRTAP3-3Q9BYR6 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
KRTAP3-3Q9BYR6 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
KRTAP3-3Q9BYR6 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
KRTAP3-3Q9BYR6 RNU6-500P-201ENST00000362349 107 ntBASIC9.69□□□□□ -0.86
KRTAP3-3Q9BYR6 RNU5B-1-201ENST00000363286 116 ntBASIC9.69□□□□□ -0.86
KRTAP3-3Q9BYR6 RNU6-236P-201ENST00000363886 106 ntBASIC9.69□□□□□ -0.86
KRTAP3-3Q9BYR6 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
KRTAP3-3Q9BYR6 TPM3-210ENST00000368530 1523 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
KRTAP3-3Q9BYR6 RNU6-413P-201ENST00000384115 107 ntBASIC9.69□□□□□ -0.86
KRTAP3-3Q9BYR6 TRBV28-201ENST00000390400 364 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
KRTAP3-3Q9BYR6 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
KRTAP3-3Q9BYR6 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
KRTAP3-3Q9BYR6 FXN-203ENST00000396366 922 ntTSL 2 BASIC9.69□□□□□ -0.86
KRTAP3-3Q9BYR6 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
KRTAP3-3Q9BYR6 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC9.69□□□□□ -0.86
KRTAP3-3Q9BYR6 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC9.69□□□□□ -0.86
KRTAP3-3Q9BYR6 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC9.69□□□□□ -0.86
KRTAP3-3Q9BYR6 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
KRTAP3-3Q9BYR6 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC9.69□□□□□ -0.86
KRTAP3-3Q9BYR6 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
KRTAP3-3Q9BYR6 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC9.69□□□□□ -0.86
KRTAP3-3Q9BYR6 AC073464.1-201ENST00000429823 534 ntBASIC9.69□□□□□ -0.86
KRTAP3-3Q9BYR6 AC022431.2-201ENST00000431789 536 ntTSL 4 BASIC9.69□□□□□ -0.86
KRTAP3-3Q9BYR6 USP9YP3-201ENST00000434481 1766 ntBASIC9.69□□□□□ -0.86
KRTAP3-3Q9BYR6 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC9.69□□□□□ -0.86
KRTAP3-3Q9BYR6 CALM1P1-201ENST00000442082 433 ntBASIC9.69□□□□□ -0.86
KRTAP3-3Q9BYR6 HMGB1P48-201ENST00000446155 598 ntBASIC9.69□□□□□ -0.86
KRTAP3-3Q9BYR6 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC9.69□□□□□ -0.86
KRTAP3-3Q9BYR6 KCNC4-AS1-201ENST00000455967 748 ntTSL 2 BASIC9.69□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms