Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
VGLL1Q99990 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
VGLL1Q99990 SPTBN2-201ENST00000309996 7866 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
VGLL1Q99990 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
VGLL1Q99990 RPSAP43-201ENST00000402237 625 ntBASIC11.44□□□□□ -0.58
VGLL1Q99990 CENPM-205ENST00000404067 905 ntTSL 3 BASIC11.44□□□□□ -0.58
VGLL1Q99990 CENPM-206ENST00000407253 818 ntTSL 2 BASIC11.44□□□□□ -0.58
VGLL1Q99990 AC211486.1-202ENST00000416371 468 ntBASIC11.44□□□□□ -0.58
VGLL1Q99990 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
VGLL1Q99990 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
VGLL1Q99990 HLA-V-204ENST00000476601 1289 ntBASIC11.44□□□□□ -0.58
VGLL1Q99990 AC211476.1-201ENST00000503899 468 ntBASIC11.44□□□□□ -0.58
VGLL1Q99990 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
VGLL1Q99990 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC11.44□□□□□ -0.58
VGLL1Q99990 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
VGLL1Q99990 AC069262.1-201ENST00000539058 672 ntBASIC11.44□□□□□ -0.58
VGLL1Q99990 CALM1-205ENST00000553542 877 ntTSL 5 BASIC11.44□□□□□ -0.58
VGLL1Q99990 AC010336.2-201ENST00000564226 506 ntBASIC11.44□□□□□ -0.58
VGLL1Q99990 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC11.44□□□□□ -0.58
VGLL1Q99990 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
VGLL1Q99990 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC11.44□□□□□ -0.58
VGLL1Q99990 METTL23-205ENST00000588302 925 ntTSL 5 BASIC11.44□□□□□ -0.58
VGLL1Q99990 COQ4-205ENST00000609948 956 ntTSL 2 BASIC11.44□□□□□ -0.58
VGLL1Q99990 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
VGLL1Q99990 AL138828.2-201ENST00000615812 383 ntBASIC11.44□□□□□ -0.58
VGLL1Q99990 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC11.44□□□□□ -0.58
VGLL1Q99990 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
VGLL1Q99990 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
VGLL1Q99990 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC11.44□□□□□ -0.58
VGLL1Q99990 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
VGLL1Q99990 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC11.44□□□□□ -0.58
VGLL1Q99990 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
VGLL1Q99990 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC11.44□□□□□ -0.58
VGLL1Q99990 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
VGLL1Q99990 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
VGLL1Q99990 DGCR9-201ENST00000609630 2415 ntBASIC11.44□□□□□ -0.58
VGLL1Q99990 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC11.44□□□□□ -0.58
VGLL1Q99990 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
VGLL1Q99990 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
VGLL1Q99990 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
VGLL1Q99990 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
VGLL1Q99990 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
VGLL1Q99990 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
VGLL1Q99990 AL139385.1-201ENST00000611744 3272 ntBASIC11.43□□□□□ -0.58
VGLL1Q99990 AC152010.1-201ENST00000415779 2006 ntBASIC11.43□□□□□ -0.58
VGLL1Q99990 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
VGLL1Q99990 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
VGLL1Q99990 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
VGLL1Q99990 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
VGLL1Q99990 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC11.43□□□□□ -0.58
VGLL1Q99990 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC11.43□□□□□ -0.58
VGLL1Q99990 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
VGLL1Q99990 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC11.43□□□□□ -0.58
VGLL1Q99990 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
VGLL1Q99990 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
VGLL1Q99990 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
VGLL1Q99990 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
VGLL1Q99990 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC11.43□□□□□ -0.58
VGLL1Q99990 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC11.43□□□□□ -0.58
VGLL1Q99990 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
VGLL1Q99990 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
VGLL1Q99990 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
VGLL1Q99990 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
VGLL1Q99990 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
VGLL1Q99990 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC11.43□□□□□ -0.58
VGLL1Q99990 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
VGLL1Q99990 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
VGLL1Q99990 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC11.43□□□□□ -0.58
VGLL1Q99990 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
VGLL1Q99990 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC11.43□□□□□ -0.58
VGLL1Q99990 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC11.43□□□□□ -0.58
VGLL1Q99990 SDHAP3-202ENST00000515467 728 ntBASIC11.43□□□□□ -0.58
VGLL1Q99990 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC11.43□□□□□ -0.58
VGLL1Q99990 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
VGLL1Q99990 AC092865.5-201ENST00000545435 363 ntBASIC11.43□□□□□ -0.58
VGLL1Q99990 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC11.43□□□□□ -0.58
VGLL1Q99990 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
VGLL1Q99990 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC11.43□□□□□ -0.58
VGLL1Q99990 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
VGLL1Q99990 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC11.43□□□□□ -0.58
VGLL1Q99990 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC11.43□□□□□ -0.58
VGLL1Q99990 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC11.43□□□□□ -0.58
VGLL1Q99990 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC11.43□□□□□ -0.58
VGLL1Q99990 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
VGLL1Q99990 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
VGLL1Q99990 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
VGLL1Q99990 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
VGLL1Q99990 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
VGLL1Q99990 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC11.43□□□□□ -0.58
VGLL1Q99990 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
VGLL1Q99990 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
VGLL1Q99990 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
VGLL1Q99990 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
VGLL1Q99990 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
VGLL1Q99990 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
VGLL1Q99990 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
VGLL1Q99990 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
VGLL1Q99990 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
VGLL1Q99990 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
VGLL1Q99990 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms