Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC16.82■□□□□ 0.28
PTPN18Q99952 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTPN18Q99952 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTPN18Q99952 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
PTPN18Q99952 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC16.81■□□□□ 0.28
PTPN18Q99952 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC16.81■□□□□ 0.28
PTPN18Q99952 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.81■□□□□ 0.28
PTPN18Q99952 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC16.81■□□□□ 0.28
PTPN18Q99952 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTPN18Q99952 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC16.81■□□□□ 0.28
PTPN18Q99952 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTPN18Q99952 AC025183.3-201ENST00000623526 1482 ntBASIC16.81■□□□□ 0.28
PTPN18Q99952 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTPN18Q99952 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTPN18Q99952 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTPN18Q99952 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
PTPN18Q99952 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTPN18Q99952 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
PTPN18Q99952 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.81■□□□□ 0.28
PTPN18Q99952 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTPN18Q99952 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.81■□□□□ 0.28
PTPN18Q99952 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTPN18Q99952 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
PTPN18Q99952 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
PTPN18Q99952 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC16.81■□□□□ 0.28
PTPN18Q99952 MIR645-201ENST00000385283 94 ntBASIC16.81■□□□□ 0.28
PTPN18Q99952 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC16.81■□□□□ 0.28
PTPN18Q99952 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC16.81■□□□□ 0.28
PTPN18Q99952 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC16.81■□□□□ 0.28
PTPN18Q99952 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PTPN18Q99952 ST13P19-201ENST00000442505 1124 ntBASIC16.81■□□□□ 0.28
PTPN18Q99952 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PTPN18Q99952 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC16.81■□□□□ 0.28
PTPN18Q99952 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC16.81■□□□□ 0.28
PTPN18Q99952 AC124068.2-201ENST00000569473 1109 ntBASIC16.81■□□□□ 0.28
PTPN18Q99952 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
PTPN18Q99952 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC16.81■□□□□ 0.28
PTPN18Q99952 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
PTPN18Q99952 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PTPN18Q99952 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTPN18Q99952 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.81■□□□□ 0.28
PTPN18Q99952 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.81■□□□□ 0.28
PTPN18Q99952 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
PTPN18Q99952 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTPN18Q99952 AL672207.1-201ENST00000328462 1570 ntBASIC16.81■□□□□ 0.28
PTPN18Q99952 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PTPN18Q99952 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTPN18Q99952 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
PTPN18Q99952 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTPN18Q99952 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTPN18Q99952 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC16.8■□□□□ 0.28
PTPN18Q99952 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PTPN18Q99952 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTPN18Q99952 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
PTPN18Q99952 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTPN18Q99952 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTPN18Q99952 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC16.8■□□□□ 0.28
PTPN18Q99952 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTPN18Q99952 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTPN18Q99952 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTPN18Q99952 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PTPN18Q99952 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTPN18Q99952 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTPN18Q99952 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PTPN18Q99952 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
PTPN18Q99952 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTPN18Q99952 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTPN18Q99952 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTPN18Q99952 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTPN18Q99952 RN7SL494P-201ENST00000461517 304 ntBASIC16.8■□□□□ 0.28
PTPN18Q99952 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC16.8■□□□□ 0.28
PTPN18Q99952 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
PTPN18Q99952 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC16.8■□□□□ 0.28
PTPN18Q99952 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC16.8■□□□□ 0.28
PTPN18Q99952 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTPN18Q99952 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC16.8■□□□□ 0.28
PTPN18Q99952 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTPN18Q99952 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTPN18Q99952 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.8■□□□□ 0.28
PTPN18Q99952 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.8■□□□□ 0.28
PTPN18Q99952 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
PTPN18Q99952 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.8■□□□□ 0.28
PTPN18Q99952 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTPN18Q99952 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC16.8■□□□□ 0.28
PTPN18Q99952 AC006372.4-201ENST00000624122 1543 ntBASIC16.8■□□□□ 0.28
PTPN18Q99952 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTPN18Q99952 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTPN18Q99952 AC087481.3-201ENST00000602886 1894 ntBASIC16.8■□□□□ 0.28
PTPN18Q99952 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
PTPN18Q99952 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
PTPN18Q99952 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTPN18Q99952 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.79■□□□□ 0.28
PTPN18Q99952 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.79■□□□□ 0.28
PTPN18Q99952 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
PTPN18Q99952 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PTPN18Q99952 OR6D1P-203ENST00000641209 4860 ntBASIC16.79■□□□□ 0.28
PTPN18Q99952 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTPN18Q99952 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
PTPN18Q99952 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC16.79■□□□□ 0.28
PTPN18Q99952 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms