Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 HIST1H2APS2-201ENST00000454426 370 ntBASIC19.17■□□□□ 0.66
ABCA3Q99758 AC113935.1-201ENST00000471722 555 ntBASIC19.17■□□□□ 0.66
ABCA3Q99758 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC19.17■□□□□ 0.66
ABCA3Q99758 AC138409.2-203ENST00000508395 553 ntTSL 4 BASIC19.17■□□□□ 0.66
ABCA3Q99758 AC090136.2-201ENST00000517809 420 ntBASIC19.17■□□□□ 0.66
ABCA3Q99758 MT1G-203ENST00000568675 628 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ABCA3Q99758 SNX11-210ENST00000582104 1282 ntTSL 2 BASIC19.17■□□□□ 0.66
ABCA3Q99758 ZFP36-201ENST00000594045 690 ntTSL 3 BASIC19.17■□□□□ 0.66
ABCA3Q99758 COQ4-204ENST00000608951 781 ntTSL 2 BASIC19.17■□□□□ 0.66
ABCA3Q99758 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ABCA3Q99758 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ABCA3Q99758 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
ABCA3Q99758 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC19.16■□□□□ 0.66
ABCA3Q99758 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC19.16■□□□□ 0.66
ABCA3Q99758 CCT8L1P-201ENST00000465400 1674 ntBASIC19.16■□□□□ 0.66
ABCA3Q99758 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
ABCA3Q99758 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC19.16■□□□□ 0.66
ABCA3Q99758 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ABCA3Q99758 PDXDC2P-206ENST00000534700 1315 ntBASIC19.16■□□□□ 0.66
ABCA3Q99758 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ABCA3Q99758 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
ABCA3Q99758 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
ABCA3Q99758 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ABCA3Q99758 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ABCA3Q99758 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ABCA3Q99758 MRPL18-201ENST00000367034 978 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ABCA3Q99758 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
ABCA3Q99758 AL157823.1-201ENST00000403727 628 ntBASIC19.16■□□□□ 0.66
ABCA3Q99758 IGLV9-49-201ENST00000427632 409 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
ABCA3Q99758 AL132657.1-201ENST00000432530 712 ntTSL 3 BASIC19.16■□□□□ 0.66
ABCA3Q99758 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC19.16■□□□□ 0.66
ABCA3Q99758 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC19.16■□□□□ 0.66
ABCA3Q99758 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ABCA3Q99758 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ABCA3Q99758 SKA2-205ENST00000580541 689 ntTSL 3 BASIC19.16■□□□□ 0.66
ABCA3Q99758 AC005323.2-202ENST00000581304 493 ntTSL 3 BASIC19.16■□□□□ 0.66
ABCA3Q99758 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ABCA3Q99758 CR392039.1-201ENST00000623217 204 ntBASIC19.16■□□□□ 0.66
ABCA3Q99758 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
ABCA3Q99758 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
ABCA3Q99758 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ABCA3Q99758 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ABCA3Q99758 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ABCA3Q99758 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ABCA3Q99758 ACE3P-201ENST00000423435 1973 ntBASIC19.15■□□□□ 0.66
ABCA3Q99758 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ABCA3Q99758 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ABCA3Q99758 AL365203.3-201ENST00000609742 2057 ntBASIC19.15■□□□□ 0.66
ABCA3Q99758 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
ABCA3Q99758 TRBV5-7-201ENST00000390378 343 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
ABCA3Q99758 PPM1N-203ENST00000396737 872 ntTSL 2 BASIC19.15■□□□□ 0.66
ABCA3Q99758 ZNF877P-201ENST00000437614 612 ntBASIC19.15■□□□□ 0.66
ABCA3Q99758 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC19.15■□□□□ 0.66
ABCA3Q99758 AL365500.1-201ENST00000442783 868 ntTSL 3 BASIC19.15■□□□□ 0.66
ABCA3Q99758 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ABCA3Q99758 RBM4-211ENST00000530235 1011 ntTSL 3 BASIC19.15■□□□□ 0.66
ABCA3Q99758 DUT-207ENST00000559416 635 ntTSL 2 BASIC19.15■□□□□ 0.66
ABCA3Q99758 FBXO36P1-201ENST00000579006 471 ntBASIC19.15■□□□□ 0.66
ABCA3Q99758 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ABCA3Q99758 AC006547.3-201ENST00000600090 583 ntTSL 3 BASIC19.15■□□□□ 0.66
ABCA3Q99758 PRMT1P1-201ENST00000604252 1009 ntBASIC19.15■□□□□ 0.66
ABCA3Q99758 HIST1H3B-201ENST00000621411 411 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
ABCA3Q99758 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ABCA3Q99758 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ABCA3Q99758 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
ABCA3Q99758 KLK4-201ENST00000324041 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ABCA3Q99758 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
ABCA3Q99758 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC19.15■□□□□ 0.66
ABCA3Q99758 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC19.15■□□□□ 0.66
ABCA3Q99758 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ABCA3Q99758 BCAS2-201ENST00000369541 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
ABCA3Q99758 TRAPPC3-201ENST00000373159 590 ntTSL 3 BASIC19.14■□□□□ 0.66
ABCA3Q99758 LINP1-201ENST00000417112 917 ntTSL 2 BASIC19.14■□□□□ 0.66
ABCA3Q99758 RPL15-208ENST00000435882 1063 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
ABCA3Q99758 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC19.14■□□□□ 0.66
ABCA3Q99758 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
ABCA3Q99758 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
ABCA3Q99758 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
ABCA3Q99758 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
ABCA3Q99758 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ABCA3Q99758 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
ABCA3Q99758 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ABCA3Q99758 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC19.14■□□□□ 0.65
ABCA3Q99758 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
ABCA3Q99758 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC19.14■□□□□ 0.65
ABCA3Q99758 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
ABCA3Q99758 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ABCA3Q99758 KCNK18-201ENST00000334549 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ABCA3Q99758 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ABCA3Q99758 RHOC-205ENST00000369636 786 ntTSL 2 BASIC19.14■□□□□ 0.65
ABCA3Q99758 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC19.14■□□□□ 0.65
ABCA3Q99758 AC104961.1-201ENST00000427605 771 ntBASIC19.14■□□□□ 0.65
ABCA3Q99758 AC092573.1-201ENST00000433054 884 ntBASIC19.14■□□□□ 0.65
ABCA3Q99758 AC092903.1-201ENST00000466506 262 ntBASIC19.14■□□□□ 0.65
ABCA3Q99758 RHOH-206ENST00000505618 1225 ntAPPRIS P1 TSL 4 BASIC19.14■□□□□ 0.65
ABCA3Q99758 AP004550.1-201ENST00000532652 514 ntTSL 3 BASIC19.14■□□□□ 0.65
ABCA3Q99758 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
ABCA3Q99758 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC19.14■□□□□ 0.65
ABCA3Q99758 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
ABCA3Q99758 AC005274.1-201ENST00000623460 802 ntBASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms