Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
RAB40CQ96S21 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
RAB40CQ96S21 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
RAB40CQ96S21 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC12.22□□□□□ -0.45
RAB40CQ96S21 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RAB40CQ96S21 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
RAB40CQ96S21 Z97205.2-201ENST00000564697 1639 ntBASIC12.22□□□□□ -0.45
RAB40CQ96S21 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
RAB40CQ96S21 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
RAB40CQ96S21 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
RAB40CQ96S21 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
RAB40CQ96S21 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
RAB40CQ96S21 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
RAB40CQ96S21 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC12.21□□□□□ -0.45
RAB40CQ96S21 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
RAB40CQ96S21 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
RAB40CQ96S21 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC12.21□□□□□ -0.45
RAB40CQ96S21 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
RAB40CQ96S21 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
RAB40CQ96S21 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
RAB40CQ96S21 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
RAB40CQ96S21 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
RAB40CQ96S21 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC12.21□□□□□ -0.45
RAB40CQ96S21 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
RAB40CQ96S21 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
RAB40CQ96S21 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
RAB40CQ96S21 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
RAB40CQ96S21 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
RAB40CQ96S21 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
RAB40CQ96S21 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
RAB40CQ96S21 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
RAB40CQ96S21 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
RAB40CQ96S21 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
RAB40CQ96S21 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
RAB40CQ96S21 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
RAB40CQ96S21 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
RAB40CQ96S21 AC015922.1-201ENST00000421102 1152 ntBASIC12.21□□□□□ -0.45
RAB40CQ96S21 HTR5BP-201ENST00000430851 1154 ntBASIC12.21□□□□□ -0.45
RAB40CQ96S21 MKNK2P1-201ENST00000437526 628 ntBASIC12.21□□□□□ -0.45
RAB40CQ96S21 ACTG1P14-201ENST00000446382 1122 ntBASIC12.21□□□□□ -0.45
RAB40CQ96S21 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC12.21□□□□□ -0.45
RAB40CQ96S21 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
RAB40CQ96S21 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC12.21□□□□□ -0.45
RAB40CQ96S21 KRT8P48-201ENST00000515599 1220 ntBASIC12.21□□□□□ -0.45
RAB40CQ96S21 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC12.21□□□□□ -0.45
RAB40CQ96S21 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC12.21□□□□□ -0.45
RAB40CQ96S21 BANF1P1-201ENST00000553684 263 ntBASIC12.21□□□□□ -0.45
RAB40CQ96S21 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
RAB40CQ96S21 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC12.21□□□□□ -0.45
RAB40CQ96S21 LITAF-210ENST00000571976 548 ntTSL 2 BASIC12.21□□□□□ -0.45
RAB40CQ96S21 LITAF-214ENST00000574703 486 ntTSL 2 BASIC12.21□□□□□ -0.45
RAB40CQ96S21 MIR3687-2-201ENST00000577708 61 ntBASIC12.21□□□□□ -0.45
RAB40CQ96S21 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
RAB40CQ96S21 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC12.21□□□□□ -0.45
RAB40CQ96S21 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC12.21□□□□□ -0.45
RAB40CQ96S21 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC12.21□□□□□ -0.45
RAB40CQ96S21 MIR3687-1-201ENST00000614492 61 ntBASIC12.21□□□□□ -0.45
RAB40CQ96S21 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC12.21□□□□□ -0.45
RAB40CQ96S21 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC12.21□□□□□ -0.45
RAB40CQ96S21 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
RAB40CQ96S21 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
RAB40CQ96S21 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
RAB40CQ96S21 AC130686.1-201ENST00000622936 2466 ntBASIC12.21□□□□□ -0.45
RAB40CQ96S21 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
RAB40CQ96S21 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC12.21□□□□□ -0.46
RAB40CQ96S21 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC12.21□□□□□ -0.46
RAB40CQ96S21 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
RAB40CQ96S21 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
RAB40CQ96S21 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC12.21□□□□□ -0.46
RAB40CQ96S21 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
RAB40CQ96S21 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
RAB40CQ96S21 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.46
RAB40CQ96S21 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
RAB40CQ96S21 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC12.21□□□□□ -0.46
RAB40CQ96S21 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
RAB40CQ96S21 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RAB40CQ96S21 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
RAB40CQ96S21 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC12.2□□□□□ -0.46
RAB40CQ96S21 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC12.2□□□□□ -0.46
RAB40CQ96S21 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
RAB40CQ96S21 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
RAB40CQ96S21 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RAB40CQ96S21 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
RAB40CQ96S21 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
RAB40CQ96S21 AL035456.1-201ENST00000456064 1369 ntBASIC12.2□□□□□ -0.46
RAB40CQ96S21 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
RAB40CQ96S21 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
RAB40CQ96S21 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
RAB40CQ96S21 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RAB40CQ96S21 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RAB40CQ96S21 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC12.2□□□□□ -0.46
RAB40CQ96S21 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
RAB40CQ96S21 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
RAB40CQ96S21 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
RAB40CQ96S21 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RAB40CQ96S21 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RAB40CQ96S21 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
RAB40CQ96S21 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
RAB40CQ96S21 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
RAB40CQ96S21 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC12.2□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms