Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CSPG4P5Q96PW8 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
CSPG4P5Q96PW8 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
CSPG4P5Q96PW8 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC15.43■□□□□ 0.06
CSPG4P5Q96PW8 AC015802.1-201ENST00000588104 1449 ntBASIC15.43■□□□□ 0.06
CSPG4P5Q96PW8 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC15.43■□□□□ 0.06
CSPG4P5Q96PW8 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
CSPG4P5Q96PW8 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CSPG4P5Q96PW8 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
CSPG4P5Q96PW8 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
CSPG4P5Q96PW8 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CSPG4P5Q96PW8 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC15.42■□□□□ 0.06
CSPG4P5Q96PW8 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC15.42■□□□□ 0.06
CSPG4P5Q96PW8 AGGF1P1-201ENST00000509500 2073 ntBASIC15.42■□□□□ 0.06
CSPG4P5Q96PW8 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
CSPG4P5Q96PW8 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CSPG4P5Q96PW8 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CSPG4P5Q96PW8 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CSPG4P5Q96PW8 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CSPG4P5Q96PW8 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CSPG4P5Q96PW8 TPM3P8-201ENST00000330554 643 ntBASIC15.42■□□□□ 0.06
CSPG4P5Q96PW8 COPE-202ENST00000349893 948 ntTSL 2 BASIC15.42■□□□□ 0.06
CSPG4P5Q96PW8 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
CSPG4P5Q96PW8 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CSPG4P5Q96PW8 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC15.42■□□□□ 0.06
CSPG4P5Q96PW8 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC15.42■□□□□ 0.06
CSPG4P5Q96PW8 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CSPG4P5Q96PW8 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
CSPG4P5Q96PW8 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC15.42■□□□□ 0.06
CSPG4P5Q96PW8 AL590640.2-201ENST00000457038 527 ntBASIC15.42■□□□□ 0.06
CSPG4P5Q96PW8 FTLP10-202ENST00000505798 471 ntBASIC15.42■□□□□ 0.06
CSPG4P5Q96PW8 AL391280.1-201ENST00000506969 1062 ntBASIC15.42■□□□□ 0.06
CSPG4P5Q96PW8 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
CSPG4P5Q96PW8 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC15.42■□□□□ 0.06
CSPG4P5Q96PW8 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC15.42■□□□□ 0.06
CSPG4P5Q96PW8 LINC02084-201ENST00000606069 1096 ntBASIC15.42■□□□□ 0.06
CSPG4P5Q96PW8 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC15.42■□□□□ 0.06
CSPG4P5Q96PW8 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CSPG4P5Q96PW8 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CSPG4P5Q96PW8 AC092135.3-201ENST00000624151 1846 ntBASIC15.42■□□□□ 0.06
CSPG4P5Q96PW8 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CSPG4P5Q96PW8 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CSPG4P5Q96PW8 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC15.42■□□□□ 0.06
CSPG4P5Q96PW8 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CSPG4P5Q96PW8 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CSPG4P5Q96PW8 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC15.42■□□□□ 0.06
CSPG4P5Q96PW8 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC15.42■□□□□ 0.06
CSPG4P5Q96PW8 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
CSPG4P5Q96PW8 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.42■□□□□ 0.06
CSPG4P5Q96PW8 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CSPG4P5Q96PW8 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
CSPG4P5Q96PW8 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC15.42■□□□□ 0.06
CSPG4P5Q96PW8 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CSPG4P5Q96PW8 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.42■□□□□ 0.06
CSPG4P5Q96PW8 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CSPG4P5Q96PW8 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CSPG4P5Q96PW8 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CSPG4P5Q96PW8 FKBP4P6-201ENST00000457486 1332 ntBASIC15.42■□□□□ 0.06
CSPG4P5Q96PW8 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CSPG4P5Q96PW8 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
CSPG4P5Q96PW8 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CSPG4P5Q96PW8 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC15.41■□□□□ 0.06
CSPG4P5Q96PW8 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CSPG4P5Q96PW8 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CSPG4P5Q96PW8 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.41■□□□□ 0.06
CSPG4P5Q96PW8 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CSPG4P5Q96PW8 AL136172.1-201ENST00000598590 1394 ntBASIC15.41■□□□□ 0.06
CSPG4P5Q96PW8 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CSPG4P5Q96PW8 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
CSPG4P5Q96PW8 EDF1-203ENST00000371649 790 ntTSL 2 BASIC15.41■□□□□ 0.06
CSPG4P5Q96PW8 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CSPG4P5Q96PW8 C2orf27AP3-201ENST00000434123 579 ntBASIC15.41■□□□□ 0.06
CSPG4P5Q96PW8 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CSPG4P5Q96PW8 FTH1P14-201ENST00000482930 551 ntBASIC15.41■□□□□ 0.06
CSPG4P5Q96PW8 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC15.41■□□□□ 0.06
CSPG4P5Q96PW8 GCOM2-201ENST00000509133 1104 ntBASIC15.41■□□□□ 0.06
CSPG4P5Q96PW8 RNA5SP486-201ENST00000515961 83 ntBASIC15.41■□□□□ 0.06
CSPG4P5Q96PW8 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC15.41■□□□□ 0.06
CSPG4P5Q96PW8 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
CSPG4P5Q96PW8 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CSPG4P5Q96PW8 AC005225.4-201ENST00000557330 545 ntBASIC15.41■□□□□ 0.06
CSPG4P5Q96PW8 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC15.41■□□□□ 0.06
CSPG4P5Q96PW8 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CSPG4P5Q96PW8 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC15.41■□□□□ 0.06
CSPG4P5Q96PW8 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CSPG4P5Q96PW8 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC15.41■□□□□ 0.06
CSPG4P5Q96PW8 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC15.41■□□□□ 0.06
CSPG4P5Q96PW8 AL354718.3-201ENST00000616414 581 ntBASIC15.41■□□□□ 0.06
CSPG4P5Q96PW8 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC15.41■□□□□ 0.06
CSPG4P5Q96PW8 CR382287.1-201ENST00000623954 586 ntBASIC15.41■□□□□ 0.06
CSPG4P5Q96PW8 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CSPG4P5Q96PW8 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CSPG4P5Q96PW8 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.41■□□□□ 0.06
CSPG4P5Q96PW8 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CSPG4P5Q96PW8 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
CSPG4P5Q96PW8 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CSPG4P5Q96PW8 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CSPG4P5Q96PW8 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CSPG4P5Q96PW8 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CSPG4P5Q96PW8 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms