Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
SYNGAP1Q96PV0 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SYNGAP1Q96PV0 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC16.95■□□□□ 0.3
SYNGAP1Q96PV0 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SYNGAP1Q96PV0 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
SYNGAP1Q96PV0 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.95■□□□□ 0.3
SYNGAP1Q96PV0 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SYNGAP1Q96PV0 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SYNGAP1Q96PV0 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SYNGAP1Q96PV0 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SYNGAP1Q96PV0 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SYNGAP1Q96PV0 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SYNGAP1Q96PV0 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC16.95■□□□□ 0.3
SYNGAP1Q96PV0 MPV17-204ENST00000399052 749 ntTSL 4 BASIC16.95■□□□□ 0.3
SYNGAP1Q96PV0 PARVG-202ENST00000415224 999 ntTSL 2 BASIC16.95■□□□□ 0.3
SYNGAP1Q96PV0 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SYNGAP1Q96PV0 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC16.95■□□□□ 0.3
SYNGAP1Q96PV0 RPL18P13-201ENST00000478088 569 ntBASIC16.95■□□□□ 0.3
SYNGAP1Q96PV0 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC16.95■□□□□ 0.3
SYNGAP1Q96PV0 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC16.95■□□□□ 0.3
SYNGAP1Q96PV0 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC16.95■□□□□ 0.3
SYNGAP1Q96PV0 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC16.95■□□□□ 0.3
SYNGAP1Q96PV0 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC16.95■□□□□ 0.3
SYNGAP1Q96PV0 AL160314.3-201ENST00000556041 767 ntBASIC16.95■□□□□ 0.3
SYNGAP1Q96PV0 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC16.95■□□□□ 0.3
SYNGAP1Q96PV0 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
SYNGAP1Q96PV0 AL133499.1-201ENST00000596207 608 ntBASIC16.95■□□□□ 0.3
SYNGAP1Q96PV0 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC16.95■□□□□ 0.3
SYNGAP1Q96PV0 AF254983.2-201ENST00000612331 135 ntBASIC16.95■□□□□ 0.3
SYNGAP1Q96PV0 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC16.95■□□□□ 0.3
SYNGAP1Q96PV0 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
SYNGAP1Q96PV0 AL353726.2-201ENST00000623259 884 ntBASIC16.95■□□□□ 0.3
SYNGAP1Q96PV0 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
SYNGAP1Q96PV0 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
SYNGAP1Q96PV0 AL138725.1-201ENST00000407347 1314 ntBASIC16.94■□□□□ 0.3
SYNGAP1Q96PV0 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SYNGAP1Q96PV0 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SYNGAP1Q96PV0 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SYNGAP1Q96PV0 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SYNGAP1Q96PV0 AC126365.1-201ENST00000578585 1514 ntBASIC16.94■□□□□ 0.3
SYNGAP1Q96PV0 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SYNGAP1Q96PV0 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
SYNGAP1Q96PV0 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SYNGAP1Q96PV0 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SYNGAP1Q96PV0 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
SYNGAP1Q96PV0 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC16.94■□□□□ 0.3
SYNGAP1Q96PV0 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SYNGAP1Q96PV0 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.94■□□□□ 0.3
SYNGAP1Q96PV0 AC023024.2-201ENST00000623561 1993 ntBASIC16.94■□□□□ 0.3
SYNGAP1Q96PV0 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
SYNGAP1Q96PV0 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SYNGAP1Q96PV0 NORAD-201ENST00000565493 5339 ntBASIC16.94■□□□□ 0.3
SYNGAP1Q96PV0 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
SYNGAP1Q96PV0 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SYNGAP1Q96PV0 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SYNGAP1Q96PV0 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SYNGAP1Q96PV0 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SYNGAP1Q96PV0 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SYNGAP1Q96PV0 AC063926.3-201ENST00000624734 5658 ntBASIC16.94■□□□□ 0.3
SYNGAP1Q96PV0 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SYNGAP1Q96PV0 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
SYNGAP1Q96PV0 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SYNGAP1Q96PV0 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC16.94■□□□□ 0.3
SYNGAP1Q96PV0 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SYNGAP1Q96PV0 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SYNGAP1Q96PV0 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
SYNGAP1Q96PV0 IGF1-203ENST00000392904 761 ntTSL 5 BASIC16.94■□□□□ 0.3
SYNGAP1Q96PV0 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SYNGAP1Q96PV0 AL596276.2-201ENST00000447525 331 ntBASIC16.94■□□□□ 0.3
SYNGAP1Q96PV0 EEF1DP6-201ENST00000449232 372 ntBASIC16.94■□□□□ 0.3
SYNGAP1Q96PV0 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC16.94■□□□□ 0.3
SYNGAP1Q96PV0 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC16.94■□□□□ 0.3
SYNGAP1Q96PV0 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC16.94■□□□□ 0.3
SYNGAP1Q96PV0 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
SYNGAP1Q96PV0 CENPX-208ENST00000584347 799 ntTSL 2 BASIC16.94■□□□□ 0.3
SYNGAP1Q96PV0 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC16.94■□□□□ 0.3
SYNGAP1Q96PV0 SPCS2P2-201ENST00000603270 608 ntBASIC16.94■□□□□ 0.3
SYNGAP1Q96PV0 AL353770.1-201ENST00000614915 403 ntBASIC16.94■□□□□ 0.3
SYNGAP1Q96PV0 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SYNGAP1Q96PV0 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SYNGAP1Q96PV0 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC16.93■□□□□ 0.3
SYNGAP1Q96PV0 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC16.93■□□□□ 0.3
SYNGAP1Q96PV0 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SYNGAP1Q96PV0 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SYNGAP1Q96PV0 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SYNGAP1Q96PV0 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SYNGAP1Q96PV0 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.93■□□□□ 0.3
SYNGAP1Q96PV0 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.93■□□□□ 0.3
SYNGAP1Q96PV0 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.93■□□□□ 0.3
SYNGAP1Q96PV0 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.93■□□□□ 0.3
SYNGAP1Q96PV0 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
SYNGAP1Q96PV0 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SYNGAP1Q96PV0 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
SYNGAP1Q96PV0 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SYNGAP1Q96PV0 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
SYNGAP1Q96PV0 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
SYNGAP1Q96PV0 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SYNGAP1Q96PV0 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
SYNGAP1Q96PV0 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.93■□□□□ 0.3
SYNGAP1Q96PV0 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms