Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 APOA2-204ENST00000464492 530 ntTSL 3 BASIC20.76■□□□□ 0.91
USP47Q96K76 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
USP47Q96K76 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC20.76■□□□□ 0.91
USP47Q96K76 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC20.76■□□□□ 0.91
USP47Q96K76 AC103810.3-201ENST00000583567 96 ntBASIC20.76■□□□□ 0.91
USP47Q96K76 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC20.76■□□□□ 0.91
USP47Q96K76 AC091271.1-201ENST00000611877 1162 ntBASIC20.76■□□□□ 0.91
USP47Q96K76 AL008638.5-201ENST00000623814 1298 ntBASIC20.76■□□□□ 0.91
USP47Q96K76 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
USP47Q96K76 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
USP47Q96K76 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
USP47Q96K76 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
USP47Q96K76 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
USP47Q96K76 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
USP47Q96K76 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
USP47Q96K76 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
USP47Q96K76 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
USP47Q96K76 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
USP47Q96K76 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
USP47Q96K76 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC20.76■□□□□ 0.91
USP47Q96K76 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
USP47Q96K76 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC20.76■□□□□ 0.91
USP47Q96K76 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC20.76■□□□□ 0.91
USP47Q96K76 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC20.76■□□□□ 0.91
USP47Q96K76 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
USP47Q96K76 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
USP47Q96K76 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP47Q96K76 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP47Q96K76 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
USP47Q96K76 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC20.75■□□□□ 0.91
USP47Q96K76 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
USP47Q96K76 SMS-201ENST00000379404 1174 ntTSL 3 BASIC20.75■□□□□ 0.91
USP47Q96K76 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP47Q96K76 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC20.75■□□□□ 0.91
USP47Q96K76 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
USP47Q96K76 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC20.75■□□□□ 0.91
USP47Q96K76 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC20.75■□□□□ 0.91
USP47Q96K76 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
USP47Q96K76 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
USP47Q96K76 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
USP47Q96K76 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC20.75■□□□□ 0.91
USP47Q96K76 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC20.75■□□□□ 0.91
USP47Q96K76 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC20.75■□□□□ 0.91
USP47Q96K76 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC20.75■□□□□ 0.91
USP47Q96K76 HARS-202ENST00000415192 1401 ntTSL 2 BASIC20.75■□□□□ 0.91
USP47Q96K76 AC015688.4-201ENST00000580780 1647 ntBASIC20.75■□□□□ 0.91
USP47Q96K76 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
USP47Q96K76 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
USP47Q96K76 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP47Q96K76 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
USP47Q96K76 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP47Q96K76 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC20.75■□□□□ 0.91
USP47Q96K76 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP47Q96K76 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC20.75■□□□□ 0.91
USP47Q96K76 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP47Q96K76 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP47Q96K76 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
USP47Q96K76 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP47Q96K76 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP47Q96K76 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP47Q96K76 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
USP47Q96K76 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
USP47Q96K76 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
USP47Q96K76 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
USP47Q96K76 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC20.75■□□□□ 0.91
USP47Q96K76 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
USP47Q96K76 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
USP47Q96K76 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
USP47Q96K76 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
USP47Q96K76 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
USP47Q96K76 AC097359.2-201ENST00000604992 2389 ntBASIC20.74■□□□□ 0.91
USP47Q96K76 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
USP47Q96K76 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
USP47Q96K76 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
USP47Q96K76 ZNF767P-206ENST00000513792 565 ntBASIC20.74■□□□□ 0.91
USP47Q96K76 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC20.74■□□□□ 0.91
USP47Q96K76 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
USP47Q96K76 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC20.74■□□□□ 0.91
USP47Q96K76 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC20.74■□□□□ 0.91
USP47Q96K76 AC104982.3-201ENST00000581995 514 ntBASIC20.74■□□□□ 0.91
USP47Q96K76 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC20.74■□□□□ 0.91
USP47Q96K76 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
USP47Q96K76 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
USP47Q96K76 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
USP47Q96K76 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
USP47Q96K76 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
USP47Q96K76 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC20.74■□□□□ 0.91
USP47Q96K76 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
USP47Q96K76 MPI-203ENST00000535694 1523 ntTSL 2 BASIC20.74■□□□□ 0.91
USP47Q96K76 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
USP47Q96K76 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
USP47Q96K76 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
USP47Q96K76 R3HDM2P2-201ENST00000401880 2116 ntBASIC20.74■□□□□ 0.91
USP47Q96K76 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
USP47Q96K76 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
USP47Q96K76 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
USP47Q96K76 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
USP47Q96K76 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
USP47Q96K76 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC20.73■□□□□ 0.91
USP47Q96K76 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms