Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHMP6Q96FZ7 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
CHMP6Q96FZ7 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
CHMP6Q96FZ7 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC15.16■□□□□ 0.02
CHMP6Q96FZ7 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CHMP6Q96FZ7 SPDYE9P-201ENST00000570642 692 ntBASIC15.16■□□□□ 0.02
CHMP6Q96FZ7 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC15.16■□□□□ 0.02
CHMP6Q96FZ7 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC15.16■□□□□ 0.02
CHMP6Q96FZ7 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC15.16■□□□□ 0.02
CHMP6Q96FZ7 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHMP6Q96FZ7 AC026979.3-201ENST00000607315 403 ntBASIC15.16■□□□□ 0.02
CHMP6Q96FZ7 SPDYE10P-202ENST00000612005 668 ntBASIC15.16■□□□□ 0.02
CHMP6Q96FZ7 SPDYE8P-202ENST00000612377 668 ntBASIC15.16■□□□□ 0.02
CHMP6Q96FZ7 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CHMP6Q96FZ7 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHMP6Q96FZ7 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
CHMP6Q96FZ7 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHMP6Q96FZ7 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHMP6Q96FZ7 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
CHMP6Q96FZ7 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHMP6Q96FZ7 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
CHMP6Q96FZ7 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHMP6Q96FZ7 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CHMP6Q96FZ7 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC15.16■□□□□ 0.02
CHMP6Q96FZ7 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
CHMP6Q96FZ7 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
CHMP6Q96FZ7 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHMP6Q96FZ7 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC15.16■□□□□ 0.02
CHMP6Q96FZ7 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC15.16■□□□□ 0.02
CHMP6Q96FZ7 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC15.16■□□□□ 0.02
CHMP6Q96FZ7 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
CHMP6Q96FZ7 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CHMP6Q96FZ7 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHMP6Q96FZ7 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CHMP6Q96FZ7 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CHMP6Q96FZ7 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CHMP6Q96FZ7 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
CHMP6Q96FZ7 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
CHMP6Q96FZ7 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CHMP6Q96FZ7 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CHMP6Q96FZ7 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC15.15■□□□□ 0.02
CHMP6Q96FZ7 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC15.15■□□□□ 0.02
CHMP6Q96FZ7 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC15.15■□□□□ 0.02
CHMP6Q96FZ7 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CHMP6Q96FZ7 CICP16-201ENST00000502609 2813 ntBASIC15.15■□□□□ 0.02
CHMP6Q96FZ7 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CHMP6Q96FZ7 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CHMP6Q96FZ7 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CHMP6Q96FZ7 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CHMP6Q96FZ7 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CHMP6Q96FZ7 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CHMP6Q96FZ7 MIR574-201ENST00000385209 96 ntBASIC15.15■□□□□ 0.02
CHMP6Q96FZ7 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC15.15■□□□□ 0.02
CHMP6Q96FZ7 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC15.15■□□□□ 0.02
CHMP6Q96FZ7 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC15.15■□□□□ 0.02
CHMP6Q96FZ7 TIMM8BP1-201ENST00000452384 211 ntBASIC15.15■□□□□ 0.02
CHMP6Q96FZ7 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC15.15■□□□□ 0.02
CHMP6Q96FZ7 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
CHMP6Q96FZ7 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC15.15■□□□□ 0.02
CHMP6Q96FZ7 FAM86C2P-203ENST00000528684 1004 ntBASIC15.15■□□□□ 0.02
CHMP6Q96FZ7 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC15.15■□□□□ 0.02
CHMP6Q96FZ7 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC15.15■□□□□ 0.02
CHMP6Q96FZ7 SUOX-214ENST00000551841 906 ntTSL 3 BASIC15.15■□□□□ 0.02
CHMP6Q96FZ7 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC15.15■□□□□ 0.02
CHMP6Q96FZ7 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CHMP6Q96FZ7 COX5A-206ENST00000568783 571 ntTSL 3 BASIC15.15■□□□□ 0.02
CHMP6Q96FZ7 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CHMP6Q96FZ7 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
CHMP6Q96FZ7 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CHMP6Q96FZ7 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
CHMP6Q96FZ7 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CHMP6Q96FZ7 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CHMP6Q96FZ7 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CHMP6Q96FZ7 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CHMP6Q96FZ7 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CHMP6Q96FZ7 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
CHMP6Q96FZ7 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CHMP6Q96FZ7 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
CHMP6Q96FZ7 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CHMP6Q96FZ7 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC15.15■□□□□ 0.02
CHMP6Q96FZ7 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CHMP6Q96FZ7 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC15.15■□□□□ 0.02
CHMP6Q96FZ7 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CHMP6Q96FZ7 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CHMP6Q96FZ7 CETP-203ENST00000566128 1733 ntTSL 5 BASIC15.14■□□□□ 0.01
CHMP6Q96FZ7 AC020910.6-201ENST00000623084 1459 ntBASIC15.14■□□□□ 0.01
CHMP6Q96FZ7 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CHMP6Q96FZ7 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
CHMP6Q96FZ7 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CHMP6Q96FZ7 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CHMP6Q96FZ7 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
CHMP6Q96FZ7 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC15.14■□□□□ 0.01
CHMP6Q96FZ7 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CHMP6Q96FZ7 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC15.14■□□□□ 0.01
CHMP6Q96FZ7 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CHMP6Q96FZ7 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CHMP6Q96FZ7 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CHMP6Q96FZ7 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CHMP6Q96FZ7 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CHMP6Q96FZ7 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms