Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
RPGRQ92834 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
RPGRQ92834 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.27■□□□□ 0.52
RPGRQ92834 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RPGRQ92834 AC013726.1-201ENST00000563747 2285 ntBASIC18.27■□□□□ 0.52
RPGRQ92834 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
RPGRQ92834 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC18.27■□□□□ 0.52
RPGRQ92834 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RPGRQ92834 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC18.27■□□□□ 0.52
RPGRQ92834 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC18.27■□□□□ 0.52
RPGRQ92834 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RPGRQ92834 MIR3188-201ENST00000583494 85 ntBASIC18.27■□□□□ 0.52
RPGRQ92834 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC18.27■□□□□ 0.52
RPGRQ92834 AC005632.3-201ENST00000605544 308 ntBASIC18.27■□□□□ 0.52
RPGRQ92834 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC18.27■□□□□ 0.52
RPGRQ92834 AC007881.3-201ENST00000608897 607 ntBASIC18.27■□□□□ 0.52
RPGRQ92834 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
RPGRQ92834 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC18.27■□□□□ 0.52
RPGRQ92834 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC18.27■□□□□ 0.52
RPGRQ92834 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RPGRQ92834 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
RPGRQ92834 AC084018.2-201ENST00000613093 2607 ntBASIC18.27■□□□□ 0.51
RPGRQ92834 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RPGRQ92834 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RPGRQ92834 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.27■□□□□ 0.51
RPGRQ92834 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.27■□□□□ 0.51
RPGRQ92834 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC18.27■□□□□ 0.51
RPGRQ92834 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC18.27■□□□□ 0.51
RPGRQ92834 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RPGRQ92834 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RPGRQ92834 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
RPGRQ92834 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC18.26■□□□□ 0.51
RPGRQ92834 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RPGRQ92834 FAS-202ENST00000352159 1722 ntTSL 5 BASIC18.26■□□□□ 0.51
RPGRQ92834 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RPGRQ92834 KRT18P9-201ENST00000604826 1300 ntBASIC18.26■□□□□ 0.51
RPGRQ92834 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
RPGRQ92834 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RPGRQ92834 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RPGRQ92834 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC18.26■□□□□ 0.51
RPGRQ92834 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC18.26■□□□□ 0.51
RPGRQ92834 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RPGRQ92834 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC18.26■□□□□ 0.51
RPGRQ92834 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RPGRQ92834 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RPGRQ92834 HYMAI-201ENST00000635591 3347 ntBASIC18.26■□□□□ 0.51
RPGRQ92834 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RPGRQ92834 HNRNPA1P27-201ENST00000412087 955 ntBASIC18.26■□□□□ 0.51
RPGRQ92834 PTPA-215ENST00000432124 567 ntTSL 4 BASIC18.26■□□□□ 0.51
RPGRQ92834 XBP1P1-201ENST00000436573 652 ntBASIC18.26■□□□□ 0.51
RPGRQ92834 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC18.26■□□□□ 0.51
RPGRQ92834 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC18.26■□□□□ 0.51
RPGRQ92834 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
RPGRQ92834 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC18.26■□□□□ 0.51
RPGRQ92834 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.26■□□□□ 0.51
RPGRQ92834 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RPGRQ92834 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RPGRQ92834 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC18.26■□□□□ 0.51
RPGRQ92834 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
RPGRQ92834 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RPGRQ92834 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RPGRQ92834 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
RPGRQ92834 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RPGRQ92834 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC18.25■□□□□ 0.51
RPGRQ92834 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RPGRQ92834 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RPGRQ92834 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC18.25■□□□□ 0.51
RPGRQ92834 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
RPGRQ92834 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
RPGRQ92834 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC18.25■□□□□ 0.51
RPGRQ92834 PCDHA1-201ENST00000378133 2726 ntBASIC18.25■□□□□ 0.51
RPGRQ92834 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
RPGRQ92834 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC18.25■□□□□ 0.51
RPGRQ92834 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RPGRQ92834 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RPGRQ92834 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC18.25■□□□□ 0.51
RPGRQ92834 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
RPGRQ92834 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC18.25■□□□□ 0.51
RPGRQ92834 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RPGRQ92834 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RPGRQ92834 PFN2-202ENST00000423691 911 ntTSL 2 BASIC18.25■□□□□ 0.51
RPGRQ92834 TSPY25P-201ENST00000429463 745 ntBASIC18.25■□□□□ 0.51
RPGRQ92834 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC18.25■□□□□ 0.51
RPGRQ92834 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RPGRQ92834 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC18.25■□□□□ 0.51
RPGRQ92834 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
RPGRQ92834 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
RPGRQ92834 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC18.25■□□□□ 0.51
RPGRQ92834 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC18.25■□□□□ 0.51
RPGRQ92834 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC18.25■□□□□ 0.51
RPGRQ92834 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC18.25■□□□□ 0.51
RPGRQ92834 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
RPGRQ92834 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
RPGRQ92834 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.25■□□□□ 0.51
RPGRQ92834 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RPGRQ92834 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RPGRQ92834 AL365203.3-201ENST00000609742 2057 ntBASIC18.25■□□□□ 0.51
RPGRQ92834 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
RPGRQ92834 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RPGRQ92834 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms