Protein–RNA interactions for Protein: Q8TC90

CCER1, Coiled-coil domain-containing glutamate-rich protein 1, humanhuman

Predicted RBP Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCER1Q8TC90 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CCER1Q8TC90 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC22.43■■□□□ 1.18
CCER1Q8TC90 PRR29-204ENST00000577953 565 ntTSL 4 BASIC22.43■■□□□ 1.18
CCER1Q8TC90 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
CCER1Q8TC90 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CCER1Q8TC90 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CCER1Q8TC90 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CCER1Q8TC90 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CCER1Q8TC90 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC22.43■■□□□ 1.18
CCER1Q8TC90 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
CCER1Q8TC90 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC22.43■■□□□ 1.18
CCER1Q8TC90 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC22.43■■□□□ 1.18
CCER1Q8TC90 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CCER1Q8TC90 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CCER1Q8TC90 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC22.43■■□□□ 1.18
CCER1Q8TC90 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CCER1Q8TC90 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
CCER1Q8TC90 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
CCER1Q8TC90 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CCER1Q8TC90 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CCER1Q8TC90 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC22.42■■□□□ 1.18
CCER1Q8TC90 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
CCER1Q8TC90 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CCER1Q8TC90 POLL-206ENST00000370172 2308 ntTSL 2 BASIC22.42■■□□□ 1.18
CCER1Q8TC90 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC22.42■■□□□ 1.18
CCER1Q8TC90 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC22.42■■□□□ 1.18
CCER1Q8TC90 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC22.42■■□□□ 1.18
CCER1Q8TC90 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC22.42■■□□□ 1.18
CCER1Q8TC90 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC22.42■■□□□ 1.18
CCER1Q8TC90 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CCER1Q8TC90 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC22.42■■□□□ 1.18
CCER1Q8TC90 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC22.42■■□□□ 1.18
CCER1Q8TC90 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC22.42■■□□□ 1.18
CCER1Q8TC90 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CCER1Q8TC90 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC22.42■■□□□ 1.18
CCER1Q8TC90 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
CCER1Q8TC90 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CCER1Q8TC90 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
CCER1Q8TC90 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC22.42■■□□□ 1.18
CCER1Q8TC90 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC22.42■■□□□ 1.18
CCER1Q8TC90 AC036164.1-201ENST00000570544 333 ntBASIC22.42■■□□□ 1.18
CCER1Q8TC90 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC22.42■■□□□ 1.18
CCER1Q8TC90 AP001160.2-201ENST00000596071 487 ntBASIC22.42■■□□□ 1.18
CCER1Q8TC90 AL662799.1-202ENST00000614205 422 ntBASIC22.42■■□□□ 1.18
CCER1Q8TC90 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC22.42■■□□□ 1.18
CCER1Q8TC90 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CCER1Q8TC90 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CCER1Q8TC90 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CCER1Q8TC90 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
CCER1Q8TC90 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CCER1Q8TC90 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
CCER1Q8TC90 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC22.42■■□□□ 1.18
CCER1Q8TC90 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
CCER1Q8TC90 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
CCER1Q8TC90 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC22.42■■□□□ 1.18
CCER1Q8TC90 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC22.42■■□□□ 1.18
CCER1Q8TC90 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
CCER1Q8TC90 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
CCER1Q8TC90 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CCER1Q8TC90 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC22.41■■□□□ 1.18
CCER1Q8TC90 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CCER1Q8TC90 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CCER1Q8TC90 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CCER1Q8TC90 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC22.41■■□□□ 1.18
CCER1Q8TC90 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
CCER1Q8TC90 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
CCER1Q8TC90 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC22.41■■□□□ 1.18
CCER1Q8TC90 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
CCER1Q8TC90 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CCER1Q8TC90 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC22.41■■□□□ 1.18
CCER1Q8TC90 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC22.41■■□□□ 1.18
CCER1Q8TC90 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC22.41■■□□□ 1.18
CCER1Q8TC90 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC22.41■■□□□ 1.18
CCER1Q8TC90 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC22.41■■□□□ 1.18
CCER1Q8TC90 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC22.41■■□□□ 1.18
CCER1Q8TC90 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC22.41■■□□□ 1.18
CCER1Q8TC90 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC22.41■■□□□ 1.18
CCER1Q8TC90 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC22.41■■□□□ 1.18
CCER1Q8TC90 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC22.41■■□□□ 1.18
CCER1Q8TC90 AC104794.3-201ENST00000566840 1248 ntBASIC22.41■■□□□ 1.18
CCER1Q8TC90 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC22.41■■□□□ 1.18
CCER1Q8TC90 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CCER1Q8TC90 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
CCER1Q8TC90 AGGF1P1-201ENST00000509500 2073 ntBASIC22.41■■□□□ 1.18
CCER1Q8TC90 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CCER1Q8TC90 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
CCER1Q8TC90 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
CCER1Q8TC90 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
CCER1Q8TC90 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CCER1Q8TC90 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC22.41■■□□□ 1.18
CCER1Q8TC90 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CCER1Q8TC90 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CCER1Q8TC90 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CCER1Q8TC90 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC22.41■■□□□ 1.18
CCER1Q8TC90 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
CCER1Q8TC90 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
CCER1Q8TC90 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
CCER1Q8TC90 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CCER1Q8TC90 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
CCER1Q8TC90 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms