Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC12.81□□□□□ -0.36
CLDND2Q8NHS1 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CLDND2Q8NHS1 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC12.81□□□□□ -0.36
CLDND2Q8NHS1 C18orf15-201ENST00000623680 2534 ntBASIC12.81□□□□□ -0.36
CLDND2Q8NHS1 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CLDND2Q8NHS1 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
CLDND2Q8NHS1 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CLDND2Q8NHS1 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC12.81□□□□□ -0.36
CLDND2Q8NHS1 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CLDND2Q8NHS1 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CLDND2Q8NHS1 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CLDND2Q8NHS1 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC12.81□□□□□ -0.36
CLDND2Q8NHS1 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
CLDND2Q8NHS1 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
CLDND2Q8NHS1 KLF2P2-201ENST00000416807 1039 ntBASIC12.81□□□□□ -0.36
CLDND2Q8NHS1 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC12.81□□□□□ -0.36
CLDND2Q8NHS1 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC12.81□□□□□ -0.36
CLDND2Q8NHS1 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC12.81□□□□□ -0.36
CLDND2Q8NHS1 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CLDND2Q8NHS1 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC12.81□□□□□ -0.36
CLDND2Q8NHS1 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC12.81□□□□□ -0.36
CLDND2Q8NHS1 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC12.81□□□□□ -0.36
CLDND2Q8NHS1 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
CLDND2Q8NHS1 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CLDND2Q8NHS1 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CLDND2Q8NHS1 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
CLDND2Q8NHS1 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC12.81□□□□□ -0.36
CLDND2Q8NHS1 AC078819.1-201ENST00000547454 765 ntBASIC12.81□□□□□ -0.36
CLDND2Q8NHS1 AC012085.1-201ENST00000548270 765 ntBASIC12.81□□□□□ -0.36
CLDND2Q8NHS1 AC023310.1-201ENST00000554836 735 ntBASIC12.81□□□□□ -0.36
CLDND2Q8NHS1 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC12.81□□□□□ -0.36
CLDND2Q8NHS1 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC12.81□□□□□ -0.36
CLDND2Q8NHS1 AC009542.2-202ENST00000619004 1067 ntBASIC12.81□□□□□ -0.36
CLDND2Q8NHS1 AC138951.2-201ENST00000623455 1161 ntBASIC12.81□□□□□ -0.36
CLDND2Q8NHS1 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC12.81□□□□□ -0.36
CLDND2Q8NHS1 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC12.81□□□□□ -0.36
CLDND2Q8NHS1 AC008687.7-202ENST00000637404 953 ntBASIC12.81□□□□□ -0.36
CLDND2Q8NHS1 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
CLDND2Q8NHS1 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CLDND2Q8NHS1 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC12.81□□□□□ -0.36
CLDND2Q8NHS1 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CLDND2Q8NHS1 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CLDND2Q8NHS1 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CLDND2Q8NHS1 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
CLDND2Q8NHS1 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CLDND2Q8NHS1 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC12.81□□□□□ -0.36
CLDND2Q8NHS1 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CLDND2Q8NHS1 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CLDND2Q8NHS1 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CLDND2Q8NHS1 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CLDND2Q8NHS1 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CLDND2Q8NHS1 AMT-204ENST00000427987 1646 ntTSL 5 BASIC12.8□□□□□ -0.36
CLDND2Q8NHS1 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
CLDND2Q8NHS1 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
CLDND2Q8NHS1 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CLDND2Q8NHS1 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CLDND2Q8NHS1 FOS-202ENST00000535987 1402 ntTSL 2 BASIC12.8□□□□□ -0.36
CLDND2Q8NHS1 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CLDND2Q8NHS1 AL138709.1-201ENST00000614840 1693 ntBASIC12.8□□□□□ -0.36
CLDND2Q8NHS1 ARHGAP23P1-201ENST00000562773 1937 ntBASIC12.8□□□□□ -0.36
CLDND2Q8NHS1 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CLDND2Q8NHS1 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CLDND2Q8NHS1 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC12.8□□□□□ -0.36
CLDND2Q8NHS1 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CLDND2Q8NHS1 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
CLDND2Q8NHS1 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CLDND2Q8NHS1 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CLDND2Q8NHS1 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CLDND2Q8NHS1 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CLDND2Q8NHS1 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CLDND2Q8NHS1 TPO-206ENST00000382269 1155 ntTSL 5 BASIC12.8□□□□□ -0.36
CLDND2Q8NHS1 ACTBP8-201ENST00000403258 1108 ntBASIC12.8□□□□□ -0.36
CLDND2Q8NHS1 NUS1P3-201ENST00000423502 862 ntBASIC12.8□□□□□ -0.36
CLDND2Q8NHS1 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC12.8□□□□□ -0.36
CLDND2Q8NHS1 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CLDND2Q8NHS1 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC12.8□□□□□ -0.36
CLDND2Q8NHS1 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CLDND2Q8NHS1 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
CLDND2Q8NHS1 FAM8A2P-201ENST00000528813 1142 ntBASIC12.8□□□□□ -0.36
CLDND2Q8NHS1 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC12.8□□□□□ -0.36
CLDND2Q8NHS1 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC12.8□□□□□ -0.36
CLDND2Q8NHS1 RN7SL560P-201ENST00000577943 264 ntBASIC12.8□□□□□ -0.36
CLDND2Q8NHS1 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC12.8□□□□□ -0.36
CLDND2Q8NHS1 INO80C-210ENST00000590757 595 ntTSL 2 BASIC12.8□□□□□ -0.36
CLDND2Q8NHS1 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CLDND2Q8NHS1 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CLDND2Q8NHS1 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
CLDND2Q8NHS1 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC12.8□□□□□ -0.36
CLDND2Q8NHS1 AC127383.1-201ENST00000444697 1800 ntBASIC12.8□□□□□ -0.36
CLDND2Q8NHS1 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CLDND2Q8NHS1 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC12.8□□□□□ -0.36
CLDND2Q8NHS1 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC12.8□□□□□ -0.36
CLDND2Q8NHS1 AC084364.1-201ENST00000551967 1556 ntBASIC12.8□□□□□ -0.36
CLDND2Q8NHS1 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC12.8□□□□□ -0.36
CLDND2Q8NHS1 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CLDND2Q8NHS1 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
CLDND2Q8NHS1 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC12.8□□□□□ -0.36
CLDND2Q8NHS1 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
CLDND2Q8NHS1 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CLDND2Q8NHS1 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms