Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 AL591163.1-201ENST00000641757 987 ntBASIC14.2□□□□□ -0.14
SIMC1Q8NDZ2 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SIMC1Q8NDZ2 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SIMC1Q8NDZ2 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC14.2□□□□□ -0.14
SIMC1Q8NDZ2 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SIMC1Q8NDZ2 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
SIMC1Q8NDZ2 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
SIMC1Q8NDZ2 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SIMC1Q8NDZ2 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SIMC1Q8NDZ2 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.2□□□□□ -0.14
SIMC1Q8NDZ2 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SIMC1Q8NDZ2 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.2□□□□□ -0.14
SIMC1Q8NDZ2 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SIMC1Q8NDZ2 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC14.2□□□□□ -0.14
SIMC1Q8NDZ2 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SIMC1Q8NDZ2 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
SIMC1Q8NDZ2 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SIMC1Q8NDZ2 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SIMC1Q8NDZ2 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SIMC1Q8NDZ2 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.19□□□□□ -0.14
SIMC1Q8NDZ2 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
SIMC1Q8NDZ2 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC14.19□□□□□ -0.14
SIMC1Q8NDZ2 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
SIMC1Q8NDZ2 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SIMC1Q8NDZ2 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SIMC1Q8NDZ2 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SIMC1Q8NDZ2 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
SIMC1Q8NDZ2 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SIMC1Q8NDZ2 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
SIMC1Q8NDZ2 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
SIMC1Q8NDZ2 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
SIMC1Q8NDZ2 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SIMC1Q8NDZ2 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SIMC1Q8NDZ2 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SIMC1Q8NDZ2 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SIMC1Q8NDZ2 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SIMC1Q8NDZ2 PCDHA3-202ENST00000532566 4594 ntBASIC14.19□□□□□ -0.14
SIMC1Q8NDZ2 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SIMC1Q8NDZ2 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.19□□□□□ -0.14
SIMC1Q8NDZ2 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
SIMC1Q8NDZ2 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SIMC1Q8NDZ2 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SIMC1Q8NDZ2 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC14.19□□□□□ -0.14
SIMC1Q8NDZ2 BRF1-202ENST00000379932 884 ntTSL 5 BASIC14.19□□□□□ -0.14
SIMC1Q8NDZ2 AP006294.1-201ENST00000415407 339 ntBASIC14.19□□□□□ -0.14
SIMC1Q8NDZ2 TMEM14DP-201ENST00000422205 345 ntBASIC14.19□□□□□ -0.14
SIMC1Q8NDZ2 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC14.19□□□□□ -0.14
SIMC1Q8NDZ2 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
SIMC1Q8NDZ2 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SIMC1Q8NDZ2 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SIMC1Q8NDZ2 INE1-201ENST00000456273 945 ntBASIC14.19□□□□□ -0.14
SIMC1Q8NDZ2 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC14.19□□□□□ -0.14
SIMC1Q8NDZ2 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC14.19□□□□□ -0.14
SIMC1Q8NDZ2 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SIMC1Q8NDZ2 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SIMC1Q8NDZ2 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC14.19□□□□□ -0.14
SIMC1Q8NDZ2 POLE2-203ENST00000553805 496 ntTSL 2 BASIC14.19□□□□□ -0.14
SIMC1Q8NDZ2 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC14.19□□□□□ -0.14
SIMC1Q8NDZ2 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SIMC1Q8NDZ2 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC14.19□□□□□ -0.14
SIMC1Q8NDZ2 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC14.19□□□□□ -0.14
SIMC1Q8NDZ2 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC14.19□□□□□ -0.14
SIMC1Q8NDZ2 METTL26-214ENST00000614890 801 ntTSL 3 BASIC14.19□□□□□ -0.14
SIMC1Q8NDZ2 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SIMC1Q8NDZ2 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
SIMC1Q8NDZ2 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SIMC1Q8NDZ2 MTHFR-210ENST00000641407 2387 ntBASIC14.19□□□□□ -0.14
SIMC1Q8NDZ2 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SIMC1Q8NDZ2 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SIMC1Q8NDZ2 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
SIMC1Q8NDZ2 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.19□□□□□ -0.14
SIMC1Q8NDZ2 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
SIMC1Q8NDZ2 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.19□□□□□ -0.14
SIMC1Q8NDZ2 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SIMC1Q8NDZ2 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SIMC1Q8NDZ2 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
SIMC1Q8NDZ2 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.19□□□□□ -0.14
SIMC1Q8NDZ2 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
SIMC1Q8NDZ2 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
SIMC1Q8NDZ2 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC14.19□□□□□ -0.14
SIMC1Q8NDZ2 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SIMC1Q8NDZ2 AC023090.2-201ENST00000625182 2110 ntBASIC14.18□□□□□ -0.14
SIMC1Q8NDZ2 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SIMC1Q8NDZ2 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.18□□□□□ -0.14
SIMC1Q8NDZ2 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SIMC1Q8NDZ2 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
SIMC1Q8NDZ2 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
SIMC1Q8NDZ2 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SIMC1Q8NDZ2 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SIMC1Q8NDZ2 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SIMC1Q8NDZ2 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.18□□□□□ -0.14
SIMC1Q8NDZ2 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SIMC1Q8NDZ2 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.18□□□□□ -0.14
SIMC1Q8NDZ2 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
SIMC1Q8NDZ2 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
SIMC1Q8NDZ2 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SIMC1Q8NDZ2 AC006504.5-208ENST00000588784 2401 ntBASIC14.18□□□□□ -0.14
SIMC1Q8NDZ2 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC14.18□□□□□ -0.14
SIMC1Q8NDZ2 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SIMC1Q8NDZ2 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms