Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CCDC168Q8NDH2 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
CCDC168Q8NDH2 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC12.37□□□□□ -0.43
CCDC168Q8NDH2 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CCDC168Q8NDH2 MIR648-201ENST00000385046 94 ntBASIC12.37□□□□□ -0.43
CCDC168Q8NDH2 TMEM95-202ENST00000389982 1191 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CCDC168Q8NDH2 BPIFB5P-201ENST00000457066 1099 ntBASIC12.37□□□□□ -0.43
CCDC168Q8NDH2 DHDDS-217ENST00000526219 1072 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CCDC168Q8NDH2 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CCDC168Q8NDH2 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
CCDC168Q8NDH2 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CCDC168Q8NDH2 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
CCDC168Q8NDH2 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CCDC168Q8NDH2 CYP4F23P-201ENST00000593402 1579 ntBASIC12.37□□□□□ -0.43
CCDC168Q8NDH2 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CCDC168Q8NDH2 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CCDC168Q8NDH2 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CCDC168Q8NDH2 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CCDC168Q8NDH2 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CCDC168Q8NDH2 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CCDC168Q8NDH2 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
CCDC168Q8NDH2 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC12.37□□□□□ -0.43
CCDC168Q8NDH2 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC12.37□□□□□ -0.43
CCDC168Q8NDH2 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CCDC168Q8NDH2 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
CCDC168Q8NDH2 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
CCDC168Q8NDH2 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CCDC168Q8NDH2 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
CCDC168Q8NDH2 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CCDC168Q8NDH2 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC12.37□□□□□ -0.43
CCDC168Q8NDH2 SURF4-203ENST00000371991 715 ntTSL 3 BASIC12.37□□□□□ -0.43
CCDC168Q8NDH2 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC12.37□□□□□ -0.43
CCDC168Q8NDH2 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CCDC168Q8NDH2 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC12.37□□□□□ -0.43
CCDC168Q8NDH2 GNAT1-202ENST00000433068 1224 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
CCDC168Q8NDH2 AC026470.1-201ENST00000478038 846 ntBASIC12.37□□□□□ -0.43
CCDC168Q8NDH2 ORAOV1P1-201ENST00000503108 395 ntBASIC12.37□□□□□ -0.43
CCDC168Q8NDH2 CTBP2P6-201ENST00000526402 1229 ntBASIC12.37□□□□□ -0.43
CCDC168Q8NDH2 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CCDC168Q8NDH2 MIR5001-201ENST00000580185 100 ntBASIC12.37□□□□□ -0.43
CCDC168Q8NDH2 AP003900.1-201ENST00000622592 859 ntTSL 3 BASIC12.37□□□□□ -0.43
CCDC168Q8NDH2 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
CCDC168Q8NDH2 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
CCDC168Q8NDH2 AL360270.3-201ENST00000609118 1348 ntBASIC12.37□□□□□ -0.43
CCDC168Q8NDH2 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CCDC168Q8NDH2 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
CCDC168Q8NDH2 EML1-203ENST00000334192 4064 ntTSL 5 BASIC12.37□□□□□ -0.43
CCDC168Q8NDH2 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
CCDC168Q8NDH2 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC12.37□□□□□ -0.43
CCDC168Q8NDH2 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC12.37□□□□□ -0.43
CCDC168Q8NDH2 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
CCDC168Q8NDH2 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CCDC168Q8NDH2 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
CCDC168Q8NDH2 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC12.37□□□□□ -0.43
CCDC168Q8NDH2 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CCDC168Q8NDH2 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
CCDC168Q8NDH2 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CCDC168Q8NDH2 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
CCDC168Q8NDH2 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
CCDC168Q8NDH2 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CCDC168Q8NDH2 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
CCDC168Q8NDH2 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
CCDC168Q8NDH2 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC12.36□□□□□ -0.43
CCDC168Q8NDH2 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CCDC168Q8NDH2 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CCDC168Q8NDH2 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CCDC168Q8NDH2 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CCDC168Q8NDH2 ATP5J-202ENST00000400087 826 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
CCDC168Q8NDH2 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC12.36□□□□□ -0.43
CCDC168Q8NDH2 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC12.36□□□□□ -0.43
CCDC168Q8NDH2 AC087071.1-201ENST00000469264 427 ntTSL 2 BASIC12.36□□□□□ -0.43
CCDC168Q8NDH2 NDUFA3-214ENST00000485876 963 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CCDC168Q8NDH2 ALG3P1-201ENST00000508806 1114 ntBASIC12.36□□□□□ -0.43
CCDC168Q8NDH2 AC226150.1-201ENST00000544259 466 ntBASIC12.36□□□□□ -0.43
CCDC168Q8NDH2 GOLGA2P7-209ENST00000560408 745 ntBASIC12.36□□□□□ -0.43
CCDC168Q8NDH2 MED11-202ENST00000573708 802 ntTSL 2 BASIC12.36□□□□□ -0.43
CCDC168Q8NDH2 KRT17P4-206ENST00000584151 719 ntTSL 4 BASIC12.36□□□□□ -0.43
CCDC168Q8NDH2 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC12.36□□□□□ -0.43
CCDC168Q8NDH2 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CCDC168Q8NDH2 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CCDC168Q8NDH2 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
CCDC168Q8NDH2 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CCDC168Q8NDH2 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
CCDC168Q8NDH2 NIFK-AS1-203ENST00000419902 1316 ntTSL 2 BASIC12.36□□□□□ -0.43
CCDC168Q8NDH2 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
CCDC168Q8NDH2 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
CCDC168Q8NDH2 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CCDC168Q8NDH2 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CCDC168Q8NDH2 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC12.36□□□□□ -0.43
CCDC168Q8NDH2 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC12.36□□□□□ -0.43
CCDC168Q8NDH2 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CCDC168Q8NDH2 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CCDC168Q8NDH2 PHB-210ENST00000511832 1509 ntTSL 2 BASIC12.36□□□□□ -0.43
CCDC168Q8NDH2 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
CCDC168Q8NDH2 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC12.36□□□□□ -0.43
CCDC168Q8NDH2 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CCDC168Q8NDH2 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CCDC168Q8NDH2 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC12.36□□□□□ -0.43
CCDC168Q8NDH2 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC12.36□□□□□ -0.43
CCDC168Q8NDH2 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms