Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC13.21□□□□□ -0.29
ZIC4Q8N9L1 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
ZIC4Q8N9L1 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ZIC4Q8N9L1 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC13.21□□□□□ -0.29
ZIC4Q8N9L1 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
ZIC4Q8N9L1 MRPL37P1-201ENST00000592451 1337 ntBASIC13.21□□□□□ -0.29
ZIC4Q8N9L1 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ZIC4Q8N9L1 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ZIC4Q8N9L1 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ZIC4Q8N9L1 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.21□□□□□ -0.29
ZIC4Q8N9L1 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ZIC4Q8N9L1 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
ZIC4Q8N9L1 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC13.21□□□□□ -0.29
ZIC4Q8N9L1 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
ZIC4Q8N9L1 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC13.21□□□□□ -0.29
ZIC4Q8N9L1 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
ZIC4Q8N9L1 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC13.21□□□□□ -0.29
ZIC4Q8N9L1 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC13.21□□□□□ -0.29
ZIC4Q8N9L1 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC13.21□□□□□ -0.29
ZIC4Q8N9L1 KRT223P-202ENST00000449164 1292 ntBASIC13.21□□□□□ -0.29
ZIC4Q8N9L1 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC13.21□□□□□ -0.29
ZIC4Q8N9L1 ALG3P1-201ENST00000508806 1114 ntBASIC13.21□□□□□ -0.29
ZIC4Q8N9L1 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC13.21□□□□□ -0.29
ZIC4Q8N9L1 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC13.21□□□□□ -0.29
ZIC4Q8N9L1 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC13.21□□□□□ -0.29
ZIC4Q8N9L1 HNRNPA1P48-202ENST00000565308 961 ntBASIC13.21□□□□□ -0.29
ZIC4Q8N9L1 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC13.21□□□□□ -0.29
ZIC4Q8N9L1 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
ZIC4Q8N9L1 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
ZIC4Q8N9L1 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
ZIC4Q8N9L1 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ZIC4Q8N9L1 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
ZIC4Q8N9L1 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC13.21□□□□□ -0.29
ZIC4Q8N9L1 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC13.21□□□□□ -0.29
ZIC4Q8N9L1 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
ZIC4Q8N9L1 KRT8P4-201ENST00000509735 1454 ntBASIC13.21□□□□□ -0.3
ZIC4Q8N9L1 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
ZIC4Q8N9L1 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
ZIC4Q8N9L1 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
ZIC4Q8N9L1 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
ZIC4Q8N9L1 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
ZIC4Q8N9L1 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.3
ZIC4Q8N9L1 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC13.21□□□□□ -0.3
ZIC4Q8N9L1 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
ZIC4Q8N9L1 AL136172.1-201ENST00000598590 1394 ntBASIC13.2□□□□□ -0.3
ZIC4Q8N9L1 AC092135.3-201ENST00000624151 1846 ntBASIC13.2□□□□□ -0.3
ZIC4Q8N9L1 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
ZIC4Q8N9L1 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ZIC4Q8N9L1 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ZIC4Q8N9L1 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ZIC4Q8N9L1 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
ZIC4Q8N9L1 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ZIC4Q8N9L1 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
ZIC4Q8N9L1 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
ZIC4Q8N9L1 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
ZIC4Q8N9L1 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
ZIC4Q8N9L1 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
ZIC4Q8N9L1 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
ZIC4Q8N9L1 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
ZIC4Q8N9L1 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ZIC4Q8N9L1 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ZIC4Q8N9L1 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ZIC4Q8N9L1 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
ZIC4Q8N9L1 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
ZIC4Q8N9L1 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
ZIC4Q8N9L1 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
ZIC4Q8N9L1 FES-203ENST00000394302 2133 ntTSL 5 BASIC13.2□□□□□ -0.3
ZIC4Q8N9L1 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
ZIC4Q8N9L1 AL136309.1-201ENST00000403917 691 ntBASIC13.2□□□□□ -0.3
ZIC4Q8N9L1 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC13.2□□□□□ -0.3
ZIC4Q8N9L1 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ZIC4Q8N9L1 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
ZIC4Q8N9L1 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
ZIC4Q8N9L1 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC13.2□□□□□ -0.3
ZIC4Q8N9L1 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
ZIC4Q8N9L1 CDC23-208ENST00000505120 455 ntTSL 3 BASIC13.2□□□□□ -0.3
ZIC4Q8N9L1 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
ZIC4Q8N9L1 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC13.2□□□□□ -0.3
ZIC4Q8N9L1 CFL1-212ENST00000531413 636 ntTSL 3 BASIC13.2□□□□□ -0.3
ZIC4Q8N9L1 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC13.2□□□□□ -0.3
ZIC4Q8N9L1 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
ZIC4Q8N9L1 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC13.2□□□□□ -0.3
ZIC4Q8N9L1 PPY2P-201ENST00000582808 702 ntBASIC13.2□□□□□ -0.3
ZIC4Q8N9L1 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
ZIC4Q8N9L1 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
ZIC4Q8N9L1 AL358472.3-201ENST00000608147 415 ntBASIC13.2□□□□□ -0.3
ZIC4Q8N9L1 ZACNP1-201ENST00000612259 710 ntBASIC13.2□□□□□ -0.3
ZIC4Q8N9L1 AP001002.3-201ENST00000623482 206 ntBASIC13.2□□□□□ -0.3
ZIC4Q8N9L1 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC13.2□□□□□ -0.3
ZIC4Q8N9L1 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
ZIC4Q8N9L1 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
ZIC4Q8N9L1 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ZIC4Q8N9L1 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
ZIC4Q8N9L1 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC13.2□□□□□ -0.3
ZIC4Q8N9L1 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC13.2□□□□□ -0.3
ZIC4Q8N9L1 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ZIC4Q8N9L1 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC13.2□□□□□ -0.3
ZIC4Q8N9L1 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ZIC4Q8N9L1 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ZIC4Q8N9L1 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms