Protein–RNA interactions for Protein: Q8N4Z0

RAB42, Putative Ras-related protein Rab-42, humanhuman

Predictions only

Length 105 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42Q8N4Z0 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC14.61□□□□□ -0.07
RAB42Q8N4Z0 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
RAB42Q8N4Z0 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RAB42Q8N4Z0 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAB42Q8N4Z0 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
RAB42Q8N4Z0 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.61□□□□□ -0.07
RAB42Q8N4Z0 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.61□□□□□ -0.07
RAB42Q8N4Z0 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
RAB42Q8N4Z0 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC14.61□□□□□ -0.07
RAB42Q8N4Z0 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAB42Q8N4Z0 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAB42Q8N4Z0 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC14.61□□□□□ -0.07
RAB42Q8N4Z0 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAB42Q8N4Z0 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAB42Q8N4Z0 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
RAB42Q8N4Z0 GZMB-202ENST00000382540 816 ntTSL 5 BASIC14.61□□□□□ -0.07
RAB42Q8N4Z0 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
RAB42Q8N4Z0 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC14.61□□□□□ -0.07
RAB42Q8N4Z0 FTLP10-202ENST00000505798 471 ntBASIC14.61□□□□□ -0.07
RAB42Q8N4Z0 AHRR-211ENST00000515206 462 ntTSL 5 BASIC14.61□□□□□ -0.07
RAB42Q8N4Z0 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC14.61□□□□□ -0.07
RAB42Q8N4Z0 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC14.61□□□□□ -0.07
RAB42Q8N4Z0 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RAB42Q8N4Z0 KRT90P-201ENST00000549264 1064 ntBASIC14.61□□□□□ -0.07
RAB42Q8N4Z0 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAB42Q8N4Z0 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC14.61□□□□□ -0.07
RAB42Q8N4Z0 GNRHR2-203ENST00000581100 1187 ntBASIC14.61□□□□□ -0.07
RAB42Q8N4Z0 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC14.61□□□□□ -0.07
RAB42Q8N4Z0 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC14.61□□□□□ -0.07
RAB42Q8N4Z0 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RAB42Q8N4Z0 ETV2-208ENST00000621247 941 ntTSL 5 BASIC14.61□□□□□ -0.07
RAB42Q8N4Z0 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAB42Q8N4Z0 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC14.61□□□□□ -0.07
RAB42Q8N4Z0 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC14.61□□□□□ -0.07
RAB42Q8N4Z0 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
RAB42Q8N4Z0 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RAB42Q8N4Z0 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAB42Q8N4Z0 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RAB42Q8N4Z0 AL354989.2-201ENST00000435838 1540 ntBASIC14.61□□□□□ -0.07
RAB42Q8N4Z0 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.61□□□□□ -0.07
RAB42Q8N4Z0 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RAB42Q8N4Z0 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RAB42Q8N4Z0 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
RAB42Q8N4Z0 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
RAB42Q8N4Z0 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAB42Q8N4Z0 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
RAB42Q8N4Z0 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.6□□□□□ -0.07
RAB42Q8N4Z0 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.6□□□□□ -0.07
RAB42Q8N4Z0 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
RAB42Q8N4Z0 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAB42Q8N4Z0 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAB42Q8N4Z0 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAB42Q8N4Z0 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAB42Q8N4Z0 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
RAB42Q8N4Z0 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAB42Q8N4Z0 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
RAB42Q8N4Z0 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RAB42Q8N4Z0 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
RAB42Q8N4Z0 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAB42Q8N4Z0 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
RAB42Q8N4Z0 MPV17-205ENST00000402310 906 ntTSL 5 BASIC14.6□□□□□ -0.07
RAB42Q8N4Z0 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RAB42Q8N4Z0 ARSEP1-201ENST00000420443 635 ntBASIC14.6□□□□□ -0.07
RAB42Q8N4Z0 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC14.6□□□□□ -0.07
RAB42Q8N4Z0 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC14.6□□□□□ -0.07
RAB42Q8N4Z0 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC14.6□□□□□ -0.07
RAB42Q8N4Z0 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC14.6□□□□□ -0.07
RAB42Q8N4Z0 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC14.6□□□□□ -0.07
RAB42Q8N4Z0 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
RAB42Q8N4Z0 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC14.6□□□□□ -0.07
RAB42Q8N4Z0 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC14.6□□□□□ -0.07
RAB42Q8N4Z0 RHOXF1P1-202ENST00000635473 501 ntBASIC14.6□□□□□ -0.07
RAB42Q8N4Z0 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC14.6□□□□□ -0.07
RAB42Q8N4Z0 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAB42Q8N4Z0 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAB42Q8N4Z0 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
RAB42Q8N4Z0 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
RAB42Q8N4Z0 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.6□□□□□ -0.07
RAB42Q8N4Z0 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC14.6□□□□□ -0.07
RAB42Q8N4Z0 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAB42Q8N4Z0 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC14.6□□□□□ -0.07
RAB42Q8N4Z0 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAB42Q8N4Z0 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
RAB42Q8N4Z0 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RAB42Q8N4Z0 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAB42Q8N4Z0 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.6□□□□□ -0.07
RAB42Q8N4Z0 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RAB42Q8N4Z0 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAB42Q8N4Z0 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAB42Q8N4Z0 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC14.6□□□□□ -0.07
RAB42Q8N4Z0 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RAB42Q8N4Z0 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB42Q8N4Z0 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RAB42Q8N4Z0 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB42Q8N4Z0 ANKRD30BP2-201ENST00000435744 1610 ntBASIC14.59□□□□□ -0.07
RAB42Q8N4Z0 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
RAB42Q8N4Z0 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.59□□□□□ -0.07
RAB42Q8N4Z0 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC14.59□□□□□ -0.07
RAB42Q8N4Z0 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB42Q8N4Z0 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms