Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 AC117503.4-201ENST00000623229 1418 ntBASIC13.65□□□□□ -0.22
COL27A1Q8IZC6 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
COL27A1Q8IZC6 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC13.65□□□□□ -0.22
COL27A1Q8IZC6 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
COL27A1Q8IZC6 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
COL27A1Q8IZC6 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC13.65□□□□□ -0.22
COL27A1Q8IZC6 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
COL27A1Q8IZC6 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
COL27A1Q8IZC6 ZEB1-AS1-208ENST00000607166 2503 ntBASIC13.65□□□□□ -0.22
COL27A1Q8IZC6 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
COL27A1Q8IZC6 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC13.65□□□□□ -0.22
COL27A1Q8IZC6 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.65□□□□□ -0.22
COL27A1Q8IZC6 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
COL27A1Q8IZC6 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC13.65□□□□□ -0.22
COL27A1Q8IZC6 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC13.65□□□□□ -0.22
COL27A1Q8IZC6 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
COL27A1Q8IZC6 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
COL27A1Q8IZC6 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
COL27A1Q8IZC6 AQP7P5-201ENST00000428759 1049 ntBASIC13.65□□□□□ -0.22
COL27A1Q8IZC6 GCSHP3-201ENST00000431120 391 ntBASIC13.65□□□□□ -0.22
COL27A1Q8IZC6 EEF1DP2-201ENST00000433698 843 ntBASIC13.65□□□□□ -0.22
COL27A1Q8IZC6 AQP7P4-201ENST00000447083 1042 ntBASIC13.65□□□□□ -0.22
COL27A1Q8IZC6 AC018638.5-201ENST00000450885 754 ntBASIC13.65□□□□□ -0.22
COL27A1Q8IZC6 AQP7P2-201ENST00000453967 1041 ntBASIC13.65□□□□□ -0.22
COL27A1Q8IZC6 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC13.65□□□□□ -0.22
COL27A1Q8IZC6 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC13.65□□□□□ -0.22
COL27A1Q8IZC6 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC13.65□□□□□ -0.22
COL27A1Q8IZC6 SORD2P-201ENST00000558556 1069 ntBASIC13.65□□□□□ -0.22
COL27A1Q8IZC6 AC140658.4-201ENST00000561990 352 ntBASIC13.65□□□□□ -0.22
COL27A1Q8IZC6 THY1-209ENST00000580275 578 ntTSL 3 BASIC13.65□□□□□ -0.22
COL27A1Q8IZC6 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC13.65□□□□□ -0.22
COL27A1Q8IZC6 RPS5-204ENST00000598098 536 ntTSL 2 BASIC13.65□□□□□ -0.22
COL27A1Q8IZC6 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC13.65□□□□□ -0.22
COL27A1Q8IZC6 AQP7P3-201ENST00000624547 1041 ntBASIC13.65□□□□□ -0.22
COL27A1Q8IZC6 ST5-261ENST00000626808 1071 ntTSL 5 BASIC13.65□□□□□ -0.22
COL27A1Q8IZC6 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC13.65□□□□□ -0.22
COL27A1Q8IZC6 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
COL27A1Q8IZC6 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC13.65□□□□□ -0.22
COL27A1Q8IZC6 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC13.65□□□□□ -0.22
COL27A1Q8IZC6 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
COL27A1Q8IZC6 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
COL27A1Q8IZC6 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13.65□□□□□ -0.22
COL27A1Q8IZC6 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
COL27A1Q8IZC6 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
COL27A1Q8IZC6 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC13.65□□□□□ -0.22
COL27A1Q8IZC6 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC13.65□□□□□ -0.23
COL27A1Q8IZC6 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
COL27A1Q8IZC6 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
COL27A1Q8IZC6 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
COL27A1Q8IZC6 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
COL27A1Q8IZC6 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
COL27A1Q8IZC6 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
COL27A1Q8IZC6 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
COL27A1Q8IZC6 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
COL27A1Q8IZC6 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC13.64□□□□□ -0.23
COL27A1Q8IZC6 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC13.64□□□□□ -0.23
COL27A1Q8IZC6 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
COL27A1Q8IZC6 RPL3P2-204ENST00000413027 1203 ntBASIC13.64□□□□□ -0.23
COL27A1Q8IZC6 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC13.64□□□□□ -0.23
COL27A1Q8IZC6 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
COL27A1Q8IZC6 AC005740.1-201ENST00000515639 522 ntBASIC13.64□□□□□ -0.23
COL27A1Q8IZC6 OR5BD1P-201ENST00000532527 817 ntBASIC13.64□□□□□ -0.23
COL27A1Q8IZC6 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
COL27A1Q8IZC6 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC13.64□□□□□ -0.23
COL27A1Q8IZC6 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC13.64□□□□□ -0.23
COL27A1Q8IZC6 AC002472.4-201ENST00000641915 272 ntBASIC13.64□□□□□ -0.23
COL27A1Q8IZC6 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
COL27A1Q8IZC6 AL354702.1-201ENST00000442006 1960 ntBASIC13.64□□□□□ -0.23
COL27A1Q8IZC6 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
COL27A1Q8IZC6 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
COL27A1Q8IZC6 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC13.64□□□□□ -0.23
COL27A1Q8IZC6 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
COL27A1Q8IZC6 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
COL27A1Q8IZC6 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
COL27A1Q8IZC6 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
COL27A1Q8IZC6 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
COL27A1Q8IZC6 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
COL27A1Q8IZC6 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
COL27A1Q8IZC6 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
COL27A1Q8IZC6 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
COL27A1Q8IZC6 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
COL27A1Q8IZC6 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
COL27A1Q8IZC6 AC020763.4-201ENST00000623414 4170 ntBASIC13.64□□□□□ -0.23
COL27A1Q8IZC6 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
COL27A1Q8IZC6 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.63□□□□□ -0.23
COL27A1Q8IZC6 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
COL27A1Q8IZC6 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
COL27A1Q8IZC6 PARN-202ENST00000420015 2360 ntTSL 2 BASIC13.63□□□□□ -0.23
COL27A1Q8IZC6 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
COL27A1Q8IZC6 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
COL27A1Q8IZC6 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.63□□□□□ -0.23
COL27A1Q8IZC6 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
COL27A1Q8IZC6 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
COL27A1Q8IZC6 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
COL27A1Q8IZC6 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC13.63□□□□□ -0.23
COL27A1Q8IZC6 LINC00265-2P-201ENST00000413372 782 ntBASIC13.63□□□□□ -0.23
COL27A1Q8IZC6 BCAS2P2-201ENST00000425064 674 ntBASIC13.63□□□□□ -0.23
COL27A1Q8IZC6 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
COL27A1Q8IZC6 KRT17P4-201ENST00000429445 819 ntBASIC13.63□□□□□ -0.23
COL27A1Q8IZC6 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms