Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
VRK2Q86Y07 EIF3FP3-201ENST00000434851 1086 ntBASIC13.89□□□□□ -0.19
VRK2Q86Y07 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC13.89□□□□□ -0.19
VRK2Q86Y07 AC114812.1-204ENST00000449669 728 ntBASIC13.89□□□□□ -0.19
VRK2Q86Y07 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
VRK2Q86Y07 AC022447.6-201ENST00000515522 438 ntBASIC13.89□□□□□ -0.19
VRK2Q86Y07 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC13.89□□□□□ -0.19
VRK2Q86Y07 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC13.89□□□□□ -0.19
VRK2Q86Y07 TMEM261P1-201ENST00000604899 340 ntBASIC13.89□□□□□ -0.19
VRK2Q86Y07 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC13.89□□□□□ -0.19
VRK2Q86Y07 AC005252.2-201ENST00000624630 1141 ntBASIC13.89□□□□□ -0.19
VRK2Q86Y07 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
VRK2Q86Y07 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
VRK2Q86Y07 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
VRK2Q86Y07 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
VRK2Q86Y07 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
VRK2Q86Y07 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
VRK2Q86Y07 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC13.89□□□□□ -0.19
VRK2Q86Y07 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
VRK2Q86Y07 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
VRK2Q86Y07 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
VRK2Q86Y07 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC13.89□□□□□ -0.19
VRK2Q86Y07 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
VRK2Q86Y07 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC13.89□□□□□ -0.19
VRK2Q86Y07 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
VRK2Q86Y07 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
VRK2Q86Y07 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
VRK2Q86Y07 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.89□□□□□ -0.19
VRK2Q86Y07 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
VRK2Q86Y07 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
VRK2Q86Y07 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
VRK2Q86Y07 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
VRK2Q86Y07 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
VRK2Q86Y07 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC13.88□□□□□ -0.19
VRK2Q86Y07 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC13.88□□□□□ -0.19
VRK2Q86Y07 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC13.88□□□□□ -0.19
VRK2Q86Y07 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
VRK2Q86Y07 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
VRK2Q86Y07 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.88□□□□□ -0.19
VRK2Q86Y07 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
VRK2Q86Y07 AL391825.1-201ENST00000457671 1364 ntBASIC13.88□□□□□ -0.19
VRK2Q86Y07 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VRK2Q86Y07 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
VRK2Q86Y07 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
VRK2Q86Y07 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VRK2Q86Y07 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
VRK2Q86Y07 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VRK2Q86Y07 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VRK2Q86Y07 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC13.88□□□□□ -0.19
VRK2Q86Y07 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
VRK2Q86Y07 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC13.88□□□□□ -0.19
VRK2Q86Y07 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
VRK2Q86Y07 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VRK2Q86Y07 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC13.88□□□□□ -0.19
VRK2Q86Y07 TPT1P11-201ENST00000458482 498 ntBASIC13.88□□□□□ -0.19
VRK2Q86Y07 ELK1P1-201ENST00000485699 580 ntBASIC13.88□□□□□ -0.19
VRK2Q86Y07 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC13.88□□□□□ -0.19
VRK2Q86Y07 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC13.88□□□□□ -0.19
VRK2Q86Y07 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC13.88□□□□□ -0.19
VRK2Q86Y07 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
VRK2Q86Y07 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.88□□□□□ -0.19
VRK2Q86Y07 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC13.88□□□□□ -0.19
VRK2Q86Y07 API5-211ENST00000534695 560 ntTSL 5 BASIC13.88□□□□□ -0.19
VRK2Q86Y07 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
VRK2Q86Y07 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC13.88□□□□□ -0.19
VRK2Q86Y07 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.88□□□□□ -0.19
VRK2Q86Y07 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC13.88□□□□□ -0.19
VRK2Q86Y07 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC13.88□□□□□ -0.19
VRK2Q86Y07 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC13.88□□□□□ -0.19
VRK2Q86Y07 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC13.88□□□□□ -0.19
VRK2Q86Y07 LINC02560-201ENST00000596379 459 ntBASIC13.88□□□□□ -0.19
VRK2Q86Y07 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC13.88□□□□□ -0.19
VRK2Q86Y07 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC13.88□□□□□ -0.19
VRK2Q86Y07 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.88□□□□□ -0.19
VRK2Q86Y07 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC13.88□□□□□ -0.19
VRK2Q86Y07 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VRK2Q86Y07 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
VRK2Q86Y07 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
VRK2Q86Y07 LRRC59-203ENST00000576448 1531 ntBASIC13.88□□□□□ -0.19
VRK2Q86Y07 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC13.88□□□□□ -0.19
VRK2Q86Y07 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
VRK2Q86Y07 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
VRK2Q86Y07 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
VRK2Q86Y07 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
VRK2Q86Y07 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VRK2Q86Y07 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VRK2Q86Y07 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VRK2Q86Y07 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
VRK2Q86Y07 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC13.88□□□□□ -0.19
VRK2Q86Y07 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VRK2Q86Y07 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
VRK2Q86Y07 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
VRK2Q86Y07 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VRK2Q86Y07 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC13.87□□□□□ -0.19
VRK2Q86Y07 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC13.87□□□□□ -0.19
VRK2Q86Y07 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
VRK2Q86Y07 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
VRK2Q86Y07 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VRK2Q86Y07 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
VRK2Q86Y07 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms