Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC15.24■□□□□ 0.03
PACS2Q86VP3 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PACS2Q86VP3 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PACS2Q86VP3 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PACS2Q86VP3 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
PACS2Q86VP3 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC15.24■□□□□ 0.03
PACS2Q86VP3 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PACS2Q86VP3 AL133387.2-201ENST00000422661 2222 ntTSL 2 BASIC15.24■□□□□ 0.03
PACS2Q86VP3 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PACS2Q86VP3 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PACS2Q86VP3 IMMT-204ENST00000410111 3001 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
PACS2Q86VP3 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
PACS2Q86VP3 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PACS2Q86VP3 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC15.24■□□□□ 0.03
PACS2Q86VP3 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PACS2Q86VP3 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PACS2Q86VP3 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC15.24■□□□□ 0.03
PACS2Q86VP3 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC15.23■□□□□ 0.03
PACS2Q86VP3 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
PACS2Q86VP3 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
PACS2Q86VP3 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PACS2Q86VP3 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC15.23■□□□□ 0.03
PACS2Q86VP3 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC15.23■□□□□ 0.03
PACS2Q86VP3 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
PACS2Q86VP3 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC15.23■□□□□ 0.03
PACS2Q86VP3 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PACS2Q86VP3 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC15.23■□□□□ 0.03
PACS2Q86VP3 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
PACS2Q86VP3 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC15.23■□□□□ 0.03
PACS2Q86VP3 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PACS2Q86VP3 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
PACS2Q86VP3 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.23■□□□□ 0.03
PACS2Q86VP3 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC15.23■□□□□ 0.03
PACS2Q86VP3 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PACS2Q86VP3 CNKSR3-204ENST00000479339 2023 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PACS2Q86VP3 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PACS2Q86VP3 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
PACS2Q86VP3 AP000344.2-201ENST00000512987 629 ntBASIC15.23■□□□□ 0.03
PACS2Q86VP3 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PACS2Q86VP3 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
PACS2Q86VP3 AC107884.1-203ENST00000530846 628 ntTSL 3 BASIC15.23■□□□□ 0.03
PACS2Q86VP3 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC15.23■□□□□ 0.03
PACS2Q86VP3 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC15.23■□□□□ 0.03
PACS2Q86VP3 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC15.23■□□□□ 0.03
PACS2Q86VP3 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC15.23■□□□□ 0.03
PACS2Q86VP3 AP001160.2-201ENST00000596071 487 ntBASIC15.23■□□□□ 0.03
PACS2Q86VP3 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
PACS2Q86VP3 AC090953.1-201ENST00000604305 1092 ntBASIC15.23■□□□□ 0.03
PACS2Q86VP3 AC099522.2-201ENST00000607001 744 ntBASIC15.23■□□□□ 0.03
PACS2Q86VP3 AC026120.1-201ENST00000611536 926 ntBASIC15.23■□□□□ 0.03
PACS2Q86VP3 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.23■□□□□ 0.03
PACS2Q86VP3 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
PACS2Q86VP3 WASH6P-202ENST00000359512 1437 ntBASIC15.23■□□□□ 0.03
PACS2Q86VP3 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.23■□□□□ 0.03
PACS2Q86VP3 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PACS2Q86VP3 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
PACS2Q86VP3 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
PACS2Q86VP3 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PACS2Q86VP3 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PACS2Q86VP3 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PACS2Q86VP3 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PACS2Q86VP3 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PACS2Q86VP3 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
PACS2Q86VP3 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC15.22■□□□□ 0.03
PACS2Q86VP3 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC15.22■□□□□ 0.03
PACS2Q86VP3 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
PACS2Q86VP3 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PACS2Q86VP3 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PACS2Q86VP3 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
PACS2Q86VP3 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PACS2Q86VP3 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC15.22■□□□□ 0.03
PACS2Q86VP3 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC15.22■□□□□ 0.03
PACS2Q86VP3 MYRIP-203ENST00000425621 2981 ntTSL 2 BASIC15.22■□□□□ 0.03
PACS2Q86VP3 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC15.22■□□□□ 0.03
PACS2Q86VP3 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.22■□□□□ 0.03
PACS2Q86VP3 FAM189A2-204ENST00000455972 2107 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
PACS2Q86VP3 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PACS2Q86VP3 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC15.22■□□□□ 0.03
PACS2Q86VP3 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
PACS2Q86VP3 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC15.22■□□□□ 0.03
PACS2Q86VP3 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC15.22■□□□□ 0.03
PACS2Q86VP3 CD99-202ENST00000381180 530 ntTSL 2 BASIC15.22■□□□□ 0.03
PACS2Q86VP3 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PACS2Q86VP3 TFAMP1-201ENST00000412727 736 ntBASIC15.22■□□□□ 0.03
PACS2Q86VP3 CNN2P11-201ENST00000429351 262 ntBASIC15.22■□□□□ 0.03
PACS2Q86VP3 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PACS2Q86VP3 TIMM8BP1-201ENST00000452384 211 ntBASIC15.22■□□□□ 0.03
PACS2Q86VP3 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC15.22■□□□□ 0.03
PACS2Q86VP3 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC15.22■□□□□ 0.03
PACS2Q86VP3 AC253576.1-201ENST00000511645 1156 ntBASIC15.22■□□□□ 0.03
PACS2Q86VP3 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.22■□□□□ 0.03
PACS2Q86VP3 CSNK1A1-209ENST00000606299 1075 ntTSL 3 BASIC15.22■□□□□ 0.03
PACS2Q86VP3 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
PACS2Q86VP3 TRPV1-209ENST00000576351 2525 ntTSL 5 BASIC15.22■□□□□ 0.03
PACS2Q86VP3 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PACS2Q86VP3 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PACS2Q86VP3 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PACS2Q86VP3 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
PACS2Q86VP3 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PACS2Q86VP3 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms