Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 AC135586.1-201ENST00000539323 574 ntBASIC15.74■□□□□ 0.11
FOXR1Q6PIV2 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC15.74■□□□□ 0.11
FOXR1Q6PIV2 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC15.74■□□□□ 0.11
FOXR1Q6PIV2 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC15.74■□□□□ 0.11
FOXR1Q6PIV2 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC15.74■□□□□ 0.11
FOXR1Q6PIV2 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC15.74■□□□□ 0.11
FOXR1Q6PIV2 ARL16-202ENST00000570561 768 ntTSL 2 BASIC15.74■□□□□ 0.11
FOXR1Q6PIV2 LITAF-210ENST00000571976 548 ntTSL 2 BASIC15.74■□□□□ 0.11
FOXR1Q6PIV2 LITAF-214ENST00000574703 486 ntTSL 2 BASIC15.74■□□□□ 0.11
FOXR1Q6PIV2 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC15.74■□□□□ 0.11
FOXR1Q6PIV2 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC15.74■□□□□ 0.11
FOXR1Q6PIV2 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC15.74■□□□□ 0.11
FOXR1Q6PIV2 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
FOXR1Q6PIV2 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC15.74■□□□□ 0.11
FOXR1Q6PIV2 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
FOXR1Q6PIV2 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
FOXR1Q6PIV2 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
FOXR1Q6PIV2 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
FOXR1Q6PIV2 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
FOXR1Q6PIV2 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
FOXR1Q6PIV2 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
FOXR1Q6PIV2 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
FOXR1Q6PIV2 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
FOXR1Q6PIV2 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
FOXR1Q6PIV2 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
FOXR1Q6PIV2 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
FOXR1Q6PIV2 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
FOXR1Q6PIV2 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
FOXR1Q6PIV2 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC15.74■□□□□ 0.11
FOXR1Q6PIV2 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
FOXR1Q6PIV2 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
FOXR1Q6PIV2 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
FOXR1Q6PIV2 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.73■□□□□ 0.11
FOXR1Q6PIV2 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
FOXR1Q6PIV2 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
FOXR1Q6PIV2 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
FOXR1Q6PIV2 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC15.73■□□□□ 0.11
FOXR1Q6PIV2 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
FOXR1Q6PIV2 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
FOXR1Q6PIV2 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
FOXR1Q6PIV2 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC15.73■□□□□ 0.11
FOXR1Q6PIV2 AC073439.1-201ENST00000624121 1774 ntBASIC15.73■□□□□ 0.11
FOXR1Q6PIV2 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
FOXR1Q6PIV2 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
FOXR1Q6PIV2 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC15.73■□□□□ 0.11
FOXR1Q6PIV2 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
FOXR1Q6PIV2 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
FOXR1Q6PIV2 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
FOXR1Q6PIV2 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
FOXR1Q6PIV2 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
FOXR1Q6PIV2 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
FOXR1Q6PIV2 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
FOXR1Q6PIV2 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC15.73■□□□□ 0.11
FOXR1Q6PIV2 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC15.73■□□□□ 0.11
FOXR1Q6PIV2 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC15.73■□□□□ 0.11
FOXR1Q6PIV2 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC15.73■□□□□ 0.11
FOXR1Q6PIV2 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC15.73■□□□□ 0.11
FOXR1Q6PIV2 MAX-210ENST00000555419 765 ntTSL 5 BASIC15.73■□□□□ 0.11
FOXR1Q6PIV2 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC15.73■□□□□ 0.11
FOXR1Q6PIV2 AC140912.1-201ENST00000577171 1054 ntBASIC15.73■□□□□ 0.11
FOXR1Q6PIV2 MIR4313-201ENST00000580760 101 ntBASIC15.73■□□□□ 0.11
FOXR1Q6PIV2 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC15.73■□□□□ 0.11
FOXR1Q6PIV2 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC15.73■□□□□ 0.11
FOXR1Q6PIV2 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
FOXR1Q6PIV2 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
FOXR1Q6PIV2 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC15.73■□□□□ 0.11
FOXR1Q6PIV2 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC15.73■□□□□ 0.11
FOXR1Q6PIV2 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.73■□□□□ 0.11
FOXR1Q6PIV2 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
FOXR1Q6PIV2 TSN-212ENST00000536142 3328 ntTSL 2 BASIC15.73■□□□□ 0.11
FOXR1Q6PIV2 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
FOXR1Q6PIV2 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC15.73■□□□□ 0.11
FOXR1Q6PIV2 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
FOXR1Q6PIV2 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
FOXR1Q6PIV2 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
FOXR1Q6PIV2 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
FOXR1Q6PIV2 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
FOXR1Q6PIV2 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
FOXR1Q6PIV2 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
FOXR1Q6PIV2 FOXO1B-201ENST00000504678 1527 ntBASIC15.73■□□□□ 0.11
FOXR1Q6PIV2 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC15.73■□□□□ 0.11
FOXR1Q6PIV2 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
FOXR1Q6PIV2 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
FOXR1Q6PIV2 FLII-221ENST00000578558 2377 ntTSL 5 BASIC15.72■□□□□ 0.11
FOXR1Q6PIV2 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
FOXR1Q6PIV2 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
FOXR1Q6PIV2 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC15.72■□□□□ 0.11
FOXR1Q6PIV2 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
FOXR1Q6PIV2 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
FOXR1Q6PIV2 AC087499.5-201ENST00000452760 1342 ntBASIC15.72■□□□□ 0.11
FOXR1Q6PIV2 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
FOXR1Q6PIV2 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
FOXR1Q6PIV2 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
FOXR1Q6PIV2 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
FOXR1Q6PIV2 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC15.72■□□□□ 0.11
FOXR1Q6PIV2 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
FOXR1Q6PIV2 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
FOXR1Q6PIV2 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
FOXR1Q6PIV2 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC15.72■□□□□ 0.11
FOXR1Q6PIV2 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms