Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TMEM53Q6P2H8 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
TMEM53Q6P2H8 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
TMEM53Q6P2H8 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TMEM53Q6P2H8 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.88□□□□□ -0.19
TMEM53Q6P2H8 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
TMEM53Q6P2H8 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TMEM53Q6P2H8 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC13.87□□□□□ -0.19
TMEM53Q6P2H8 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TMEM53Q6P2H8 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
TMEM53Q6P2H8 TKT-203ENST00000423525 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TMEM53Q6P2H8 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC13.87□□□□□ -0.19
TMEM53Q6P2H8 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC13.87□□□□□ -0.19
TMEM53Q6P2H8 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
TMEM53Q6P2H8 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TMEM53Q6P2H8 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TMEM53Q6P2H8 C1orf109-201ENST00000358011 2355 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
TMEM53Q6P2H8 FLII-221ENST00000578558 2377 ntTSL 5 BASIC13.87□□□□□ -0.19
TMEM53Q6P2H8 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
TMEM53Q6P2H8 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC13.87□□□□□ -0.19
TMEM53Q6P2H8 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TMEM53Q6P2H8 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
TMEM53Q6P2H8 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TMEM53Q6P2H8 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TMEM53Q6P2H8 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TMEM53Q6P2H8 CENPM-205ENST00000404067 905 ntTSL 3 BASIC13.87□□□□□ -0.19
TMEM53Q6P2H8 CENPM-206ENST00000407253 818 ntTSL 2 BASIC13.87□□□□□ -0.19
TMEM53Q6P2H8 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC13.87□□□□□ -0.19
TMEM53Q6P2H8 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC13.87□□□□□ -0.19
TMEM53Q6P2H8 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC13.87□□□□□ -0.19
TMEM53Q6P2H8 AC055876.3-201ENST00000431496 288 ntBASIC13.87□□□□□ -0.19
TMEM53Q6P2H8 MDH2-205ENST00000461263 648 ntTSL 2 BASIC13.87□□□□□ -0.19
TMEM53Q6P2H8 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC13.87□□□□□ -0.19
TMEM53Q6P2H8 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC13.87□□□□□ -0.19
TMEM53Q6P2H8 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC13.87□□□□□ -0.19
TMEM53Q6P2H8 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC13.87□□□□□ -0.19
TMEM53Q6P2H8 RFPL4AP1-201ENST00000530883 850 ntBASIC13.87□□□□□ -0.19
TMEM53Q6P2H8 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC13.87□□□□□ -0.19
TMEM53Q6P2H8 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC13.87□□□□□ -0.19
TMEM53Q6P2H8 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC13.87□□□□□ -0.19
TMEM53Q6P2H8 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TMEM53Q6P2H8 AC138649.4-201ENST00000612222 287 ntBASIC13.87□□□□□ -0.19
TMEM53Q6P2H8 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TMEM53Q6P2H8 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TMEM53Q6P2H8 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TMEM53Q6P2H8 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
TMEM53Q6P2H8 NTRK2-203ENST00000323115 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TMEM53Q6P2H8 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC13.87□□□□□ -0.19
TMEM53Q6P2H8 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TMEM53Q6P2H8 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC13.87□□□□□ -0.19
TMEM53Q6P2H8 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC13.87□□□□□ -0.19
TMEM53Q6P2H8 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
TMEM53Q6P2H8 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC13.87□□□□□ -0.19
TMEM53Q6P2H8 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TMEM53Q6P2H8 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC13.87□□□□□ -0.19
TMEM53Q6P2H8 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TMEM53Q6P2H8 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
TMEM53Q6P2H8 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
TMEM53Q6P2H8 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TMEM53Q6P2H8 AC087499.5-201ENST00000452760 1342 ntBASIC13.87□□□□□ -0.19
TMEM53Q6P2H8 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TMEM53Q6P2H8 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TMEM53Q6P2H8 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
TMEM53Q6P2H8 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TMEM53Q6P2H8 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC13.87□□□□□ -0.19
TMEM53Q6P2H8 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.87□□□□□ -0.19
TMEM53Q6P2H8 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
TMEM53Q6P2H8 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TMEM53Q6P2H8 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
TMEM53Q6P2H8 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
TMEM53Q6P2H8 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TMEM53Q6P2H8 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TMEM53Q6P2H8 ARAF-203ENST00000377045 2458 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
TMEM53Q6P2H8 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TMEM53Q6P2H8 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TMEM53Q6P2H8 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC13.86□□□□□ -0.19
TMEM53Q6P2H8 AC011474.4-201ENST00000623523 2076 ntBASIC13.86□□□□□ -0.19
TMEM53Q6P2H8 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC13.86□□□□□ -0.19
TMEM53Q6P2H8 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
TMEM53Q6P2H8 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
TMEM53Q6P2H8 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TMEM53Q6P2H8 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TMEM53Q6P2H8 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TMEM53Q6P2H8 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TMEM53Q6P2H8 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
TMEM53Q6P2H8 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC13.86□□□□□ -0.19
TMEM53Q6P2H8 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC13.86□□□□□ -0.19
TMEM53Q6P2H8 NRXN1-259ENST00000637511 3651 ntTSL 5 BASIC13.86□□□□□ -0.19
TMEM53Q6P2H8 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TMEM53Q6P2H8 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TMEM53Q6P2H8 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TMEM53Q6P2H8 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TMEM53Q6P2H8 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC13.86□□□□□ -0.19
TMEM53Q6P2H8 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TMEM53Q6P2H8 BASP1P1-201ENST00000430708 665 ntBASIC13.86□□□□□ -0.19
TMEM53Q6P2H8 AC092580.3-201ENST00000430932 139 ntBASIC13.86□□□□□ -0.19
TMEM53Q6P2H8 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC13.86□□□□□ -0.19
TMEM53Q6P2H8 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC13.86□□□□□ -0.19
TMEM53Q6P2H8 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TMEM53Q6P2H8 MPI-209ENST00000564003 1195 ntTSL 2 BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms