Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
RNF20Q5VTR2 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC17.92■□□□□ 0.46
RNF20Q5VTR2 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
RNF20Q5VTR2 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF20Q5VTR2 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF20Q5VTR2 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RNF20Q5VTR2 SALL4P5-201ENST00000419001 1760 ntBASIC17.91■□□□□ 0.46
RNF20Q5VTR2 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC17.91■□□□□ 0.46
RNF20Q5VTR2 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC17.91■□□□□ 0.46
RNF20Q5VTR2 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC17.91■□□□□ 0.46
RNF20Q5VTR2 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF20Q5VTR2 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
RNF20Q5VTR2 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF20Q5VTR2 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF20Q5VTR2 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RNF20Q5VTR2 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC17.91■□□□□ 0.46
RNF20Q5VTR2 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF20Q5VTR2 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RNF20Q5VTR2 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
RNF20Q5VTR2 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RNF20Q5VTR2 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RNF20Q5VTR2 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
RNF20Q5VTR2 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC17.91■□□□□ 0.46
RNF20Q5VTR2 AC011495.1-201ENST00000498085 584 ntBASIC17.91■□□□□ 0.46
RNF20Q5VTR2 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC17.91■□□□□ 0.46
RNF20Q5VTR2 TDH-203ENST00000531764 1110 ntBASIC17.91■□□□□ 0.46
RNF20Q5VTR2 PIGL-212ENST00000581006 554 ntTSL 4 BASIC17.91■□□□□ 0.46
RNF20Q5VTR2 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
RNF20Q5VTR2 AC010319.3-201ENST00000597028 470 ntBASIC17.91■□□□□ 0.46
RNF20Q5VTR2 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC17.91■□□□□ 0.46
RNF20Q5VTR2 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
RNF20Q5VTR2 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC17.91■□□□□ 0.46
RNF20Q5VTR2 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC17.91■□□□□ 0.46
RNF20Q5VTR2 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC17.91■□□□□ 0.46
RNF20Q5VTR2 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF20Q5VTR2 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC17.91■□□□□ 0.46
RNF20Q5VTR2 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
RNF20Q5VTR2 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF20Q5VTR2 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF20Q5VTR2 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC17.91■□□□□ 0.46
RNF20Q5VTR2 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF20Q5VTR2 AC015656.1-201ENST00000624209 3578 ntBASIC17.91■□□□□ 0.46
RNF20Q5VTR2 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF20Q5VTR2 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF20Q5VTR2 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
RNF20Q5VTR2 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF20Q5VTR2 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF20Q5VTR2 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RNF20Q5VTR2 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF20Q5VTR2 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RNF20Q5VTR2 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF20Q5VTR2 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF20Q5VTR2 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
RNF20Q5VTR2 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF20Q5VTR2 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF20Q5VTR2 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RNF20Q5VTR2 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RNF20Q5VTR2 SERF2-209ENST00000409646 559 ntTSL 4 BASIC17.9■□□□□ 0.46
RNF20Q5VTR2 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF20Q5VTR2 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC17.9■□□□□ 0.46
RNF20Q5VTR2 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF20Q5VTR2 TPT1P11-201ENST00000458482 498 ntBASIC17.9■□□□□ 0.46
RNF20Q5VTR2 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC17.9■□□□□ 0.46
RNF20Q5VTR2 AC068587.3-201ENST00000526613 355 ntBASIC17.9■□□□□ 0.46
RNF20Q5VTR2 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
RNF20Q5VTR2 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC17.9■□□□□ 0.46
RNF20Q5VTR2 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RNF20Q5VTR2 MIR5189-201ENST00000577370 114 ntBASIC17.9■□□□□ 0.46
RNF20Q5VTR2 AC138761.1-201ENST00000584393 385 ntBASIC17.9■□□□□ 0.46
RNF20Q5VTR2 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
RNF20Q5VTR2 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC17.9■□□□□ 0.46
RNF20Q5VTR2 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RNF20Q5VTR2 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF20Q5VTR2 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC17.9■□□□□ 0.46
RNF20Q5VTR2 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF20Q5VTR2 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF20Q5VTR2 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
RNF20Q5VTR2 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF20Q5VTR2 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF20Q5VTR2 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF20Q5VTR2 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC17.9■□□□□ 0.46
RNF20Q5VTR2 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF20Q5VTR2 MX1-218ENST00000619682 1980 ntTSL 5 BASIC17.9■□□□□ 0.46
RNF20Q5VTR2 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC17.89■□□□□ 0.46
RNF20Q5VTR2 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC17.89■□□□□ 0.45
RNF20Q5VTR2 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF20Q5VTR2 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF20Q5VTR2 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC17.89■□□□□ 0.45
RNF20Q5VTR2 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC17.89■□□□□ 0.45
RNF20Q5VTR2 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC17.89■□□□□ 0.45
RNF20Q5VTR2 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC17.89■□□□□ 0.45
RNF20Q5VTR2 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF20Q5VTR2 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF20Q5VTR2 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC17.89■□□□□ 0.45
RNF20Q5VTR2 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RNF20Q5VTR2 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
RNF20Q5VTR2 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF20Q5VTR2 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC17.89■□□□□ 0.45
RNF20Q5VTR2 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF20Q5VTR2 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms