Protein–RNA interactions for Protein: Q52LD8

RFTN2, Raftlin-2, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN2Q52LD8 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC14.45□□□□□ -0.1
RFTN2Q52LD8 RPL13AP25-201ENST00000484130 612 ntBASIC14.45□□□□□ -0.1
RFTN2Q52LD8 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RFTN2Q52LD8 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RFTN2Q52LD8 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC14.45□□□□□ -0.1
RFTN2Q52LD8 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
RFTN2Q52LD8 AC022447.6-201ENST00000515522 438 ntBASIC14.45□□□□□ -0.1
RFTN2Q52LD8 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC14.45□□□□□ -0.1
RFTN2Q52LD8 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC14.45□□□□□ -0.1
RFTN2Q52LD8 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RFTN2Q52LD8 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC14.45□□□□□ -0.1
RFTN2Q52LD8 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RFTN2Q52LD8 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC14.45□□□□□ -0.1
RFTN2Q52LD8 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC14.45□□□□□ -0.1
RFTN2Q52LD8 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC14.45□□□□□ -0.1
RFTN2Q52LD8 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RFTN2Q52LD8 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RFTN2Q52LD8 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RFTN2Q52LD8 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC14.45□□□□□ -0.1
RFTN2Q52LD8 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC14.45□□□□□ -0.1
RFTN2Q52LD8 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC14.45□□□□□ -0.1
RFTN2Q52LD8 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC14.45□□□□□ -0.1
RFTN2Q52LD8 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RFTN2Q52LD8 AMT-232ENST00000636199 1546 ntTSL 5 BASIC14.45□□□□□ -0.1
RFTN2Q52LD8 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RFTN2Q52LD8 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RFTN2Q52LD8 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC14.45□□□□□ -0.1
RFTN2Q52LD8 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
RFTN2Q52LD8 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RFTN2Q52LD8 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC14.45□□□□□ -0.1
RFTN2Q52LD8 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RFTN2Q52LD8 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC14.45□□□□□ -0.1
RFTN2Q52LD8 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
RFTN2Q52LD8 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC14.45□□□□□ -0.1
RFTN2Q52LD8 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
RFTN2Q52LD8 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RFTN2Q52LD8 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.44□□□□□ -0.1
RFTN2Q52LD8 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RFTN2Q52LD8 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RFTN2Q52LD8 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RFTN2Q52LD8 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RFTN2Q52LD8 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
RFTN2Q52LD8 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC14.44□□□□□ -0.1
RFTN2Q52LD8 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
RFTN2Q52LD8 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RFTN2Q52LD8 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RFTN2Q52LD8 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RFTN2Q52LD8 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RFTN2Q52LD8 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
RFTN2Q52LD8 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RFTN2Q52LD8 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
RFTN2Q52LD8 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RFTN2Q52LD8 AL139094.1-201ENST00000405549 1188 ntBASIC14.44□□□□□ -0.1
RFTN2Q52LD8 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RFTN2Q52LD8 MEP1AP4-201ENST00000423244 1087 ntBASIC14.44□□□□□ -0.1
RFTN2Q52LD8 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC14.44□□□□□ -0.1
RFTN2Q52LD8 TMPRSS11CP-201ENST00000453277 683 ntBASIC14.44□□□□□ -0.1
RFTN2Q52LD8 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC14.44□□□□□ -0.1
RFTN2Q52LD8 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC14.44□□□□□ -0.1
RFTN2Q52LD8 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC14.44□□□□□ -0.1
RFTN2Q52LD8 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC14.44□□□□□ -0.1
RFTN2Q52LD8 RRP7BP-205ENST00000566851 833 ntBASIC14.44□□□□□ -0.1
RFTN2Q52LD8 SPDYE22P-201ENST00000582158 798 ntBASIC14.44□□□□□ -0.1
RFTN2Q52LD8 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC14.44□□□□□ -0.1
RFTN2Q52LD8 AC106028.4-201ENST00000614509 607 ntBASIC14.44□□□□□ -0.1
RFTN2Q52LD8 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
RFTN2Q52LD8 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC14.44□□□□□ -0.1
RFTN2Q52LD8 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RFTN2Q52LD8 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RFTN2Q52LD8 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RFTN2Q52LD8 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RFTN2Q52LD8 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
RFTN2Q52LD8 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RFTN2Q52LD8 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RFTN2Q52LD8 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RFTN2Q52LD8 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.44□□□□□ -0.1
RFTN2Q52LD8 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RFTN2Q52LD8 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
RFTN2Q52LD8 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RFTN2Q52LD8 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC14.44□□□□□ -0.1
RFTN2Q52LD8 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC14.43□□□□□ -0.1
RFTN2Q52LD8 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RFTN2Q52LD8 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RFTN2Q52LD8 MVK-214ENST00000629016 1591 ntTSL 5 BASIC14.43□□□□□ -0.1
RFTN2Q52LD8 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RFTN2Q52LD8 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.43□□□□□ -0.1
RFTN2Q52LD8 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RFTN2Q52LD8 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RFTN2Q52LD8 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
RFTN2Q52LD8 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RFTN2Q52LD8 INTS4P2-202ENST00000614726 2019 ntBASIC14.43□□□□□ -0.1
RFTN2Q52LD8 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
RFTN2Q52LD8 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC14.43□□□□□ -0.1
RFTN2Q52LD8 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
RFTN2Q52LD8 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
RFTN2Q52LD8 PNMT-202ENST00000394246 821 ntTSL 2 BASIC14.43□□□□□ -0.1
RFTN2Q52LD8 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RFTN2Q52LD8 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC14.43□□□□□ -0.1
RFTN2Q52LD8 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RFTN2Q52LD8 CD81-207ENST00000481687 890 ntTSL 2 BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms