Protein–RNA interactions for Protein: Q2M3C7

SPHKAP, A-kinase anchor protein SPHKAP, humanhuman

Predictions only

Length 1,700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHKAPQ2M3C7 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SPHKAPQ2M3C7 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SPHKAPQ2M3C7 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
SPHKAPQ2M3C7 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC20.91■□□□□ 0.94
SPHKAPQ2M3C7 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
SPHKAPQ2M3C7 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC20.91■□□□□ 0.94
SPHKAPQ2M3C7 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC20.91■□□□□ 0.94
SPHKAPQ2M3C7 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC20.91■□□□□ 0.94
SPHKAPQ2M3C7 AC012362.1-201ENST00000434906 739 ntBASIC20.91■□□□□ 0.94
SPHKAPQ2M3C7 LYPLA2P1-203ENST00000447689 696 ntBASIC20.91■□□□□ 0.94
SPHKAPQ2M3C7 RGS5-216ENST00000449680 788 ntTSL 3 BASIC20.91■□□□□ 0.94
SPHKAPQ2M3C7 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC20.91■□□□□ 0.94
SPHKAPQ2M3C7 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SPHKAPQ2M3C7 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
SPHKAPQ2M3C7 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SPHKAPQ2M3C7 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
SPHKAPQ2M3C7 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC20.91■□□□□ 0.94
SPHKAPQ2M3C7 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC20.91■□□□□ 0.94
SPHKAPQ2M3C7 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
SPHKAPQ2M3C7 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SPHKAPQ2M3C7 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SPHKAPQ2M3C7 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
SPHKAPQ2M3C7 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SPHKAPQ2M3C7 HLA-DMA-203ENST00000395305 777 ntBASIC20.9■□□□□ 0.94
SPHKAPQ2M3C7 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC20.9■□□□□ 0.94
SPHKAPQ2M3C7 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SPHKAPQ2M3C7 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC20.9■□□□□ 0.94
SPHKAPQ2M3C7 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC20.9■□□□□ 0.94
SPHKAPQ2M3C7 PTK2-225ENST00000520892 571 ntTSL 4 BASIC20.9■□□□□ 0.94
SPHKAPQ2M3C7 CR383656.3-201ENST00000551315 183 ntBASIC20.9■□□□□ 0.94
SPHKAPQ2M3C7 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC20.9■□□□□ 0.94
SPHKAPQ2M3C7 MIR5196-201ENST00000578146 115 ntBASIC20.9■□□□□ 0.94
SPHKAPQ2M3C7 MIR3180-2-201ENST00000581748 88 ntBASIC20.9■□□□□ 0.94
SPHKAPQ2M3C7 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC20.9■□□□□ 0.94
SPHKAPQ2M3C7 HLA-C-210ENST00000640219 976 ntBASIC20.9■□□□□ 0.94
SPHKAPQ2M3C7 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SPHKAPQ2M3C7 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SPHKAPQ2M3C7 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC20.9■□□□□ 0.94
SPHKAPQ2M3C7 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SPHKAPQ2M3C7 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SPHKAPQ2M3C7 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC20.9■□□□□ 0.94
SPHKAPQ2M3C7 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC20.9■□□□□ 0.94
SPHKAPQ2M3C7 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC20.9■□□□□ 0.94
SPHKAPQ2M3C7 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
SPHKAPQ2M3C7 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC20.9■□□□□ 0.94
SPHKAPQ2M3C7 AC126177.1-201ENST00000547829 2218 ntBASIC20.9■□□□□ 0.94
SPHKAPQ2M3C7 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC20.9■□□□□ 0.94
SPHKAPQ2M3C7 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SPHKAPQ2M3C7 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC20.9■□□□□ 0.94
SPHKAPQ2M3C7 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC20.9■□□□□ 0.94
SPHKAPQ2M3C7 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
SPHKAPQ2M3C7 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SPHKAPQ2M3C7 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SPHKAPQ2M3C7 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC20.9■□□□□ 0.94
SPHKAPQ2M3C7 TCAF2P1-201ENST00000291129 2421 ntBASIC20.9■□□□□ 0.94
SPHKAPQ2M3C7 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SPHKAPQ2M3C7 AC067931.2-201ENST00000623655 2003 ntBASIC20.9■□□□□ 0.94
SPHKAPQ2M3C7 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SPHKAPQ2M3C7 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SPHKAPQ2M3C7 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SPHKAPQ2M3C7 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SPHKAPQ2M3C7 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SPHKAPQ2M3C7 AC140658.4-201ENST00000561990 352 ntBASIC20.9■□□□□ 0.94
SPHKAPQ2M3C7 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC20.9■□□□□ 0.94
SPHKAPQ2M3C7 AL133467.4-201ENST00000602953 725 ntBASIC20.9■□□□□ 0.94
SPHKAPQ2M3C7 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC20.9■□□□□ 0.94
SPHKAPQ2M3C7 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC20.89■□□□□ 0.94
SPHKAPQ2M3C7 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
SPHKAPQ2M3C7 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.94
SPHKAPQ2M3C7 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC20.89■□□□□ 0.94
SPHKAPQ2M3C7 AL591122.2-201ENST00000624125 1853 ntBASIC20.89■□□□□ 0.94
SPHKAPQ2M3C7 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC20.89■□□□□ 0.94
SPHKAPQ2M3C7 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC20.89■□□□□ 0.94
SPHKAPQ2M3C7 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC20.89■□□□□ 0.93
SPHKAPQ2M3C7 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SPHKAPQ2M3C7 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC20.89■□□□□ 0.93
SPHKAPQ2M3C7 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.93
SPHKAPQ2M3C7 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC20.89■□□□□ 0.93
SPHKAPQ2M3C7 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
SPHKAPQ2M3C7 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC20.89■□□□□ 0.93
SPHKAPQ2M3C7 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC20.89■□□□□ 0.93
SPHKAPQ2M3C7 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SPHKAPQ2M3C7 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SPHKAPQ2M3C7 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC20.89■□□□□ 0.93
SPHKAPQ2M3C7 AC004837.1-201ENST00000446267 564 ntBASIC20.89■□□□□ 0.93
SPHKAPQ2M3C7 KRT18P66-201ENST00000452970 1269 ntBASIC20.89■□□□□ 0.93
SPHKAPQ2M3C7 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SPHKAPQ2M3C7 SCARNA12-201ENST00000459155 270 ntBASIC20.89■□□□□ 0.93
SPHKAPQ2M3C7 KLF17P1-201ENST00000547105 1126 ntBASIC20.89■□□□□ 0.93
SPHKAPQ2M3C7 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC20.89■□□□□ 0.93
SPHKAPQ2M3C7 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SPHKAPQ2M3C7 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC20.89■□□□□ 0.93
SPHKAPQ2M3C7 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SPHKAPQ2M3C7 AGK-211ENST00000629555 2765 ntTSL 5 BASIC20.89■□□□□ 0.93
SPHKAPQ2M3C7 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
SPHKAPQ2M3C7 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
SPHKAPQ2M3C7 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SPHKAPQ2M3C7 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
SPHKAPQ2M3C7 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC20.88■□□□□ 0.93
SPHKAPQ2M3C7 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms