Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFX7Q2KHR2 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
RFX7Q2KHR2 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFX7Q2KHR2 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFX7Q2KHR2 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
RFX7Q2KHR2 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFX7Q2KHR2 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFX7Q2KHR2 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFX7Q2KHR2 AC106881.1-201ENST00000605849 3329 ntBASIC17.93■□□□□ 0.46
RFX7Q2KHR2 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFX7Q2KHR2 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC17.93■□□□□ 0.46
RFX7Q2KHR2 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC17.93■□□□□ 0.46
RFX7Q2KHR2 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFX7Q2KHR2 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
RFX7Q2KHR2 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFX7Q2KHR2 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RFX7Q2KHR2 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
RFX7Q2KHR2 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RFX7Q2KHR2 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC17.92■□□□□ 0.46
RFX7Q2KHR2 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC17.92■□□□□ 0.46
RFX7Q2KHR2 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RFX7Q2KHR2 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC17.92■□□□□ 0.46
RFX7Q2KHR2 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RFX7Q2KHR2 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC17.92■□□□□ 0.46
RFX7Q2KHR2 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC17.92■□□□□ 0.46
RFX7Q2KHR2 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RFX7Q2KHR2 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RFX7Q2KHR2 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RFX7Q2KHR2 AL162426.1-201ENST00000624141 743 ntBASIC17.92■□□□□ 0.46
RFX7Q2KHR2 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
RFX7Q2KHR2 KHSRPP1-201ENST00000427983 1768 ntBASIC17.92■□□□□ 0.46
RFX7Q2KHR2 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
RFX7Q2KHR2 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RFX7Q2KHR2 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC17.92■□□□□ 0.46
RFX7Q2KHR2 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC17.92■□□□□ 0.46
RFX7Q2KHR2 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RFX7Q2KHR2 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC17.92■□□□□ 0.46
RFX7Q2KHR2 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RFX7Q2KHR2 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
RFX7Q2KHR2 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC17.92■□□□□ 0.46
RFX7Q2KHR2 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
RFX7Q2KHR2 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RFX7Q2KHR2 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RFX7Q2KHR2 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RFX7Q2KHR2 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RFX7Q2KHR2 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RFX7Q2KHR2 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RFX7Q2KHR2 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
RFX7Q2KHR2 MVK-214ENST00000629016 1591 ntTSL 5 BASIC17.92■□□□□ 0.46
RFX7Q2KHR2 GSN-203ENST00000373808 2664 ntTSL 2 BASIC17.92■□□□□ 0.46
RFX7Q2KHR2 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
RFX7Q2KHR2 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RFX7Q2KHR2 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
RFX7Q2KHR2 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RFX7Q2KHR2 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RFX7Q2KHR2 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RFX7Q2KHR2 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
RFX7Q2KHR2 RBM38-204ENST00000371219 760 ntTSL 2 BASIC17.91■□□□□ 0.46
RFX7Q2KHR2 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RFX7Q2KHR2 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC17.91■□□□□ 0.46
RFX7Q2KHR2 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC17.91■□□□□ 0.46
RFX7Q2KHR2 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RFX7Q2KHR2 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC17.91■□□□□ 0.46
RFX7Q2KHR2 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC17.91■□□□□ 0.46
RFX7Q2KHR2 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RFX7Q2KHR2 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
RFX7Q2KHR2 DIO1-215ENST00000610607 796 ntTSL 5 BASIC17.91■□□□□ 0.46
RFX7Q2KHR2 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC17.91■□□□□ 0.46
RFX7Q2KHR2 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
RFX7Q2KHR2 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RFX7Q2KHR2 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
RFX7Q2KHR2 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RFX7Q2KHR2 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RFX7Q2KHR2 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC17.91■□□□□ 0.46
RFX7Q2KHR2 RER1-203ENST00000378513 3000 ntTSL 3 BASIC17.91■□□□□ 0.46
RFX7Q2KHR2 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RFX7Q2KHR2 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RFX7Q2KHR2 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
RFX7Q2KHR2 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RFX7Q2KHR2 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RFX7Q2KHR2 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RFX7Q2KHR2 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC17.91■□□□□ 0.46
RFX7Q2KHR2 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
RFX7Q2KHR2 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RFX7Q2KHR2 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RFX7Q2KHR2 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RFX7Q2KHR2 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RFX7Q2KHR2 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RFX7Q2KHR2 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC17.91■□□□□ 0.46
RFX7Q2KHR2 MYB-201ENST00000316528 3571 ntTSL 5 BASIC17.91■□□□□ 0.46
RFX7Q2KHR2 MYB-241ENST00000616088 3573 ntTSL 5 BASIC17.91■□□□□ 0.46
RFX7Q2KHR2 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RFX7Q2KHR2 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RFX7Q2KHR2 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RFX7Q2KHR2 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RFX7Q2KHR2 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RFX7Q2KHR2 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RFX7Q2KHR2 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RFX7Q2KHR2 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC17.91■□□□□ 0.46
RFX7Q2KHR2 SPTLC1P5-201ENST00000450718 252 ntBASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms