Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 AC006435.4-201ENST00000625037 234 ntBASIC17.74■□□□□ 0.43
PDS5AQ29RF7 DDX5-235ENST00000630471 473 ntTSL 4 BASIC17.74■□□□□ 0.43
PDS5AQ29RF7 AL356737.1-201ENST00000634391 234 ntBASIC17.74■□□□□ 0.43
PDS5AQ29RF7 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
PDS5AQ29RF7 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDS5AQ29RF7 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDS5AQ29RF7 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDS5AQ29RF7 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC17.74■□□□□ 0.43
PDS5AQ29RF7 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PDS5AQ29RF7 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
PDS5AQ29RF7 KRT8P21-201ENST00000430398 1491 ntBASIC17.74■□□□□ 0.43
PDS5AQ29RF7 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDS5AQ29RF7 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PDS5AQ29RF7 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PDS5AQ29RF7 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDS5AQ29RF7 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDS5AQ29RF7 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDS5AQ29RF7 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDS5AQ29RF7 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDS5AQ29RF7 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDS5AQ29RF7 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDS5AQ29RF7 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDS5AQ29RF7 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDS5AQ29RF7 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDS5AQ29RF7 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
PDS5AQ29RF7 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDS5AQ29RF7 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDS5AQ29RF7 GPI-205ENST00000586425 1799 ntTSL 5 BASIC17.74■□□□□ 0.43
PDS5AQ29RF7 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
PDS5AQ29RF7 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDS5AQ29RF7 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
PDS5AQ29RF7 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PDS5AQ29RF7 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC17.73■□□□□ 0.43
PDS5AQ29RF7 AC239868.1-201ENST00000369385 493 ntBASIC17.73■□□□□ 0.43
PDS5AQ29RF7 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC17.73■□□□□ 0.43
PDS5AQ29RF7 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC17.73■□□□□ 0.43
PDS5AQ29RF7 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC17.73■□□□□ 0.43
PDS5AQ29RF7 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC17.73■□□□□ 0.43
PDS5AQ29RF7 IGHVIII-5-2-201ENST00000522505 261 ntBASIC17.73■□□□□ 0.43
PDS5AQ29RF7 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC17.73■□□□□ 0.43
PDS5AQ29RF7 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC17.73■□□□□ 0.43
PDS5AQ29RF7 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC17.73■□□□□ 0.43
PDS5AQ29RF7 MIR4754-201ENST00000582477 89 ntBASIC17.73■□□□□ 0.43
PDS5AQ29RF7 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
PDS5AQ29RF7 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
PDS5AQ29RF7 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC17.73■□□□□ 0.43
PDS5AQ29RF7 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC17.73■□□□□ 0.43
PDS5AQ29RF7 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
PDS5AQ29RF7 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC17.73■□□□□ 0.43
PDS5AQ29RF7 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PDS5AQ29RF7 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PDS5AQ29RF7 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PDS5AQ29RF7 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC17.73■□□□□ 0.43
PDS5AQ29RF7 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PDS5AQ29RF7 AC018629.1-201ENST00000623381 1736 ntBASIC17.73■□□□□ 0.43
PDS5AQ29RF7 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC17.73■□□□□ 0.43
PDS5AQ29RF7 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC17.73■□□□□ 0.43
PDS5AQ29RF7 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC17.73■□□□□ 0.43
PDS5AQ29RF7 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PDS5AQ29RF7 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PDS5AQ29RF7 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC17.73■□□□□ 0.43
PDS5AQ29RF7 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
PDS5AQ29RF7 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC17.73■□□□□ 0.43
PDS5AQ29RF7 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC17.73■□□□□ 0.43
PDS5AQ29RF7 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PDS5AQ29RF7 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC17.73■□□□□ 0.43
PDS5AQ29RF7 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PDS5AQ29RF7 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
PDS5AQ29RF7 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC17.73■□□□□ 0.43
PDS5AQ29RF7 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PDS5AQ29RF7 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PDS5AQ29RF7 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
PDS5AQ29RF7 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC17.73■□□□□ 0.43
PDS5AQ29RF7 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC17.72■□□□□ 0.43
PDS5AQ29RF7 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC17.72■□□□□ 0.43
PDS5AQ29RF7 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC17.72■□□□□ 0.43
PDS5AQ29RF7 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC17.72■□□□□ 0.43
PDS5AQ29RF7 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC17.72■□□□□ 0.43
PDS5AQ29RF7 AC012618.1-201ENST00000461223 412 ntBASIC17.72■□□□□ 0.43
PDS5AQ29RF7 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDS5AQ29RF7 AC090857.1-201ENST00000527400 390 ntBASIC17.72■□□□□ 0.43
PDS5AQ29RF7 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDS5AQ29RF7 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC17.72■□□□□ 0.43
PDS5AQ29RF7 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC17.72■□□□□ 0.43
PDS5AQ29RF7 AC027237.1-201ENST00000560942 655 ntBASIC17.72■□□□□ 0.43
PDS5AQ29RF7 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC17.72■□□□□ 0.43
PDS5AQ29RF7 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC17.72■□□□□ 0.43
PDS5AQ29RF7 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PDS5AQ29RF7 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PDS5AQ29RF7 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
PDS5AQ29RF7 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDS5AQ29RF7 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PDS5AQ29RF7 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDS5AQ29RF7 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDS5AQ29RF7 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDS5AQ29RF7 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
PDS5AQ29RF7 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDS5AQ29RF7 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDS5AQ29RF7 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDS5AQ29RF7 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms