Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDK3Q00526 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDK3Q00526 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
CDK3Q00526 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
CDK3Q00526 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC14.68□□□□□ -0.06
CDK3Q00526 RBM38-204ENST00000371219 760 ntTSL 2 BASIC14.68□□□□□ -0.06
CDK3Q00526 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
CDK3Q00526 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDK3Q00526 GPAA1P2-201ENST00000417923 928 ntBASIC14.68□□□□□ -0.06
CDK3Q00526 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC14.68□□□□□ -0.06
CDK3Q00526 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC14.68□□□□□ -0.06
CDK3Q00526 OARD1-212ENST00000482515 832 ntTSL 2 BASIC14.68□□□□□ -0.06
CDK3Q00526 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC14.68□□□□□ -0.06
CDK3Q00526 AP001258.2-201ENST00000529891 490 ntBASIC14.68□□□□□ -0.06
CDK3Q00526 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC14.68□□□□□ -0.06
CDK3Q00526 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC14.68□□□□□ -0.06
CDK3Q00526 DUX4L46-201ENST00000566845 751 ntBASIC14.68□□□□□ -0.06
CDK3Q00526 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
CDK3Q00526 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDK3Q00526 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDK3Q00526 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CDK3Q00526 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
CDK3Q00526 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC14.68□□□□□ -0.06
CDK3Q00526 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CDK3Q00526 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDK3Q00526 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDK3Q00526 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CDK3Q00526 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDK3Q00526 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDK3Q00526 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDK3Q00526 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDK3Q00526 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDK3Q00526 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDK3Q00526 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDK3Q00526 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.67□□□□□ -0.06
CDK3Q00526 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDK3Q00526 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CDK3Q00526 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.67□□□□□ -0.06
CDK3Q00526 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.67□□□□□ -0.06
CDK3Q00526 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CDK3Q00526 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CDK3Q00526 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.67□□□□□ -0.06
CDK3Q00526 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
CDK3Q00526 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDK3Q00526 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
CDK3Q00526 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.67□□□□□ -0.06
CDK3Q00526 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDK3Q00526 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDK3Q00526 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.67□□□□□ -0.06
CDK3Q00526 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.67□□□□□ -0.06
CDK3Q00526 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CDK3Q00526 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
CDK3Q00526 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDK3Q00526 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDK3Q00526 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDK3Q00526 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDK3Q00526 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDK3Q00526 SMS-201ENST00000379404 1174 ntTSL 3 BASIC14.67□□□□□ -0.06
CDK3Q00526 AK6-201ENST00000380818 1183 ntTSL 2 BASIC14.67□□□□□ -0.06
CDK3Q00526 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CDK3Q00526 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CDK3Q00526 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC14.67□□□□□ -0.06
CDK3Q00526 KRT8P13-201ENST00000463294 1010 ntBASIC14.67□□□□□ -0.06
CDK3Q00526 AC022494.1-201ENST00000466044 728 ntBASIC14.67□□□□□ -0.06
CDK3Q00526 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC14.67□□□□□ -0.06
CDK3Q00526 AC126915.1-201ENST00000522847 1038 ntBASIC14.67□□□□□ -0.06
CDK3Q00526 MIR4783-201ENST00000580343 82 ntBASIC14.67□□□□□ -0.06
CDK3Q00526 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CDK3Q00526 AL162426.1-201ENST00000624141 743 ntBASIC14.67□□□□□ -0.06
CDK3Q00526 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
CDK3Q00526 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDK3Q00526 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
CDK3Q00526 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CDK3Q00526 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CDK3Q00526 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC14.67□□□□□ -0.06
CDK3Q00526 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
CDK3Q00526 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
CDK3Q00526 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CDK3Q00526 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDK3Q00526 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDK3Q00526 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CDK3Q00526 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC14.66□□□□□ -0.06
CDK3Q00526 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CDK3Q00526 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDK3Q00526 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC14.66□□□□□ -0.06
CDK3Q00526 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDK3Q00526 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDK3Q00526 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC14.66□□□□□ -0.06
CDK3Q00526 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDK3Q00526 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDK3Q00526 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDK3Q00526 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDK3Q00526 KRT8P29-201ENST00000420409 1371 ntBASIC14.66□□□□□ -0.06
CDK3Q00526 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDK3Q00526 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CDK3Q00526 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
CDK3Q00526 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CDK3Q00526 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CDK3Q00526 HNRNPA1P32-201ENST00000396326 963 ntBASIC14.66□□□□□ -0.06
CDK3Q00526 PUDPP3-201ENST00000445368 636 ntBASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms