Protein–RNA interactions for Protein: P98155

VLDLR, Very low-density lipoprotein receptor, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLRP98155 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VLDLRP98155 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VLDLRP98155 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
VLDLRP98155 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
VLDLRP98155 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
VLDLRP98155 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC14.07□□□□□ -0.16
VLDLRP98155 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC14.07□□□□□ -0.16
VLDLRP98155 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC14.07□□□□□ -0.16
VLDLRP98155 TERF1P3-201ENST00000505638 1227 ntBASIC14.07□□□□□ -0.16
VLDLRP98155 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC14.07□□□□□ -0.16
VLDLRP98155 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
VLDLRP98155 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC14.07□□□□□ -0.16
VLDLRP98155 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC14.07□□□□□ -0.16
VLDLRP98155 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC14.07□□□□□ -0.16
VLDLRP98155 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
VLDLRP98155 GPER1-207ENST00000619052 571 ntTSL 2 BASIC14.07□□□□□ -0.16
VLDLRP98155 AC105233.6-201ENST00000642093 218 ntBASIC14.07□□□□□ -0.16
VLDLRP98155 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VLDLRP98155 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC14.07□□□□□ -0.16
VLDLRP98155 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
VLDLRP98155 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC14.07□□□□□ -0.16
VLDLRP98155 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
VLDLRP98155 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC14.07□□□□□ -0.16
VLDLRP98155 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
VLDLRP98155 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC14.07□□□□□ -0.16
VLDLRP98155 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC14.07□□□□□ -0.16
VLDLRP98155 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VLDLRP98155 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC14.07□□□□□ -0.16
VLDLRP98155 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
VLDLRP98155 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VLDLRP98155 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VLDLRP98155 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
VLDLRP98155 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VLDLRP98155 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC14.06□□□□□ -0.16
VLDLRP98155 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
VLDLRP98155 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.06□□□□□ -0.16
VLDLRP98155 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
VLDLRP98155 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
VLDLRP98155 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC14.06□□□□□ -0.16
VLDLRP98155 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC14.06□□□□□ -0.16
VLDLRP98155 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC14.06□□□□□ -0.16
VLDLRP98155 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VLDLRP98155 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.06□□□□□ -0.16
VLDLRP98155 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
VLDLRP98155 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
VLDLRP98155 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VLDLRP98155 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
VLDLRP98155 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
VLDLRP98155 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
VLDLRP98155 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
VLDLRP98155 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
VLDLRP98155 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VLDLRP98155 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
VLDLRP98155 COPE-202ENST00000349893 948 ntTSL 2 BASIC14.06□□□□□ -0.16
VLDLRP98155 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
VLDLRP98155 MIR943-201ENST00000401286 94 ntBASIC14.06□□□□□ -0.16
VLDLRP98155 SPDYE7P-202ENST00000420373 878 ntBASIC14.06□□□□□ -0.16
VLDLRP98155 AC107890.1-201ENST00000422478 521 ntBASIC14.06□□□□□ -0.16
VLDLRP98155 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
VLDLRP98155 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC14.06□□□□□ -0.16
VLDLRP98155 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC14.06□□□□□ -0.16
VLDLRP98155 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
VLDLRP98155 AC010336.2-201ENST00000564226 506 ntBASIC14.06□□□□□ -0.16
VLDLRP98155 NAA60-208ENST00000570819 833 ntTSL 2 BASIC14.06□□□□□ -0.16
VLDLRP98155 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
VLDLRP98155 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC14.06□□□□□ -0.16
VLDLRP98155 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC14.06□□□□□ -0.16
VLDLRP98155 AL109936.8-201ENST00000641772 604 ntBASIC14.06□□□□□ -0.16
VLDLRP98155 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC14.06□□□□□ -0.16
VLDLRP98155 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
VLDLRP98155 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC14.06□□□□□ -0.16
VLDLRP98155 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC14.06□□□□□ -0.16
VLDLRP98155 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
VLDLRP98155 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VLDLRP98155 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
VLDLRP98155 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
VLDLRP98155 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC14.06□□□□□ -0.16
VLDLRP98155 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VLDLRP98155 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC14.06□□□□□ -0.16
VLDLRP98155 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
VLDLRP98155 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VLDLRP98155 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
VLDLRP98155 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
VLDLRP98155 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VLDLRP98155 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
VLDLRP98155 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VLDLRP98155 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
VLDLRP98155 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
VLDLRP98155 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
VLDLRP98155 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VLDLRP98155 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VLDLRP98155 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
VLDLRP98155 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
VLDLRP98155 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
VLDLRP98155 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
VLDLRP98155 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
VLDLRP98155 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
VLDLRP98155 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VLDLRP98155 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VLDLRP98155 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms