Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HIST1H3AP68431 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
HIST1H3AP68431 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
HIST1H3AP68431 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC13.1□□□□□ -0.31
HIST1H3AP68431 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
HIST1H3AP68431 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
HIST1H3AP68431 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HIST1H3AP68431 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC13.1□□□□□ -0.31
HIST1H3AP68431 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
HIST1H3AP68431 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
HIST1H3AP68431 AC026748.1-201ENST00000624349 3251 ntBASIC13.1□□□□□ -0.31
HIST1H3AP68431 AGGF1P1-201ENST00000509500 2073 ntBASIC13.1□□□□□ -0.31
HIST1H3AP68431 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
HIST1H3AP68431 RN7SKP230-201ENST00000365642 335 ntBASIC13.1□□□□□ -0.31
HIST1H3AP68431 AC098614.1-201ENST00000368528 745 ntBASIC13.1□□□□□ -0.31
HIST1H3AP68431 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC13.1□□□□□ -0.31
HIST1H3AP68431 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC13.1□□□□□ -0.31
HIST1H3AP68431 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC13.1□□□□□ -0.31
HIST1H3AP68431 POM121L8P-201ENST00000417732 1281 ntBASIC13.1□□□□□ -0.31
HIST1H3AP68431 PNKD-204ENST00000436005 978 ntTSL 5 BASIC13.1□□□□□ -0.31
HIST1H3AP68431 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
HIST1H3AP68431 POM121L9P-203ENST00000441984 1285 ntBASIC13.1□□□□□ -0.31
HIST1H3AP68431 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC13.1□□□□□ -0.31
HIST1H3AP68431 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
HIST1H3AP68431 MESTP3-201ENST00000503460 968 ntBASIC13.1□□□□□ -0.31
HIST1H3AP68431 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC13.1□□□□□ -0.31
HIST1H3AP68431 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC13.1□□□□□ -0.31
HIST1H3AP68431 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
HIST1H3AP68431 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
HIST1H3AP68431 AC131206.1-201ENST00000538078 1211 ntBASIC13.1□□□□□ -0.31
HIST1H3AP68431 PTP4A1P2-201ENST00000546033 454 ntBASIC13.1□□□□□ -0.31
HIST1H3AP68431 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC13.1□□□□□ -0.31
HIST1H3AP68431 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
HIST1H3AP68431 AC010319.3-201ENST00000597028 470 ntBASIC13.1□□□□□ -0.31
HIST1H3AP68431 AC145423.3-201ENST00000615987 467 ntBASIC13.1□□□□□ -0.31
HIST1H3AP68431 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC13.1□□□□□ -0.31
HIST1H3AP68431 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
HIST1H3AP68431 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
HIST1H3AP68431 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
HIST1H3AP68431 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HIST1H3AP68431 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
HIST1H3AP68431 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
HIST1H3AP68431 MVK-214ENST00000629016 1591 ntTSL 5 BASIC13.1□□□□□ -0.31
HIST1H3AP68431 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HIST1H3AP68431 FES-203ENST00000394302 2133 ntTSL 5 BASIC13.1□□□□□ -0.31
HIST1H3AP68431 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
HIST1H3AP68431 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
HIST1H3AP68431 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
HIST1H3AP68431 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HIST1H3AP68431 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HIST1H3AP68431 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC13.1□□□□□ -0.31
HIST1H3AP68431 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC13.1□□□□□ -0.31
HIST1H3AP68431 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
HIST1H3AP68431 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HIST1H3AP68431 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
HIST1H3AP68431 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
HIST1H3AP68431 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC13.09□□□□□ -0.31
HIST1H3AP68431 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.09□□□□□ -0.31
HIST1H3AP68431 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC13.09□□□□□ -0.31
HIST1H3AP68431 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HIST1H3AP68431 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC13.09□□□□□ -0.31
HIST1H3AP68431 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
HIST1H3AP68431 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
HIST1H3AP68431 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
HIST1H3AP68431 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HIST1H3AP68431 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HIST1H3AP68431 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
HIST1H3AP68431 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC13.09□□□□□ -0.31
HIST1H3AP68431 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
HIST1H3AP68431 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HIST1H3AP68431 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
HIST1H3AP68431 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
HIST1H3AP68431 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
HIST1H3AP68431 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
HIST1H3AP68431 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
HIST1H3AP68431 AP006294.1-201ENST00000415407 339 ntBASIC13.09□□□□□ -0.31
HIST1H3AP68431 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
HIST1H3AP68431 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
HIST1H3AP68431 AC245100.3-201ENST00000441281 285 ntBASIC13.09□□□□□ -0.31
HIST1H3AP68431 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC13.09□□□□□ -0.31
HIST1H3AP68431 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC13.09□□□□□ -0.31
HIST1H3AP68431 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC13.09□□□□□ -0.31
HIST1H3AP68431 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
HIST1H3AP68431 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC13.09□□□□□ -0.31
HIST1H3AP68431 AC022447.6-201ENST00000515522 438 ntBASIC13.09□□□□□ -0.31
HIST1H3AP68431 AC068587.3-201ENST00000526613 355 ntBASIC13.09□□□□□ -0.31
HIST1H3AP68431 RN7SL48P-201ENST00000579283 293 ntBASIC13.09□□□□□ -0.31
HIST1H3AP68431 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
HIST1H3AP68431 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HIST1H3AP68431 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
HIST1H3AP68431 CICP4-201ENST00000447359 2812 ntBASIC13.09□□□□□ -0.31
HIST1H3AP68431 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HIST1H3AP68431 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
HIST1H3AP68431 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
HIST1H3AP68431 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.09□□□□□ -0.31
HIST1H3AP68431 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HIST1H3AP68431 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
HIST1H3AP68431 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC13.09□□□□□ -0.31
HIST1H3AP68431 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HIST1H3AP68431 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms