Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 GUK1-206ENST00000366723 845 ntTSL 5 BASIC16.05■□□□□ 0.16
RAD23BP54727 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC16.05■□□□□ 0.16
RAD23BP54727 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
RAD23BP54727 HIST1H2BPS3-201ENST00000419683 341 ntBASIC16.05■□□□□ 0.16
RAD23BP54727 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC16.05■□□□□ 0.16
RAD23BP54727 KRT43P-201ENST00000434019 910 ntBASIC16.05■□□□□ 0.16
RAD23BP54727 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAD23BP54727 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC16.05■□□□□ 0.16
RAD23BP54727 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
RAD23BP54727 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
RAD23BP54727 AC018442.1-201ENST00000421439 2061 ntBASIC16.05■□□□□ 0.16
RAD23BP54727 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAD23BP54727 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
RAD23BP54727 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RAD23BP54727 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RAD23BP54727 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAD23BP54727 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC16.05■□□□□ 0.16
RAD23BP54727 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC16.05■□□□□ 0.16
RAD23BP54727 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAD23BP54727 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAD23BP54727 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
RAD23BP54727 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
RAD23BP54727 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC16.04■□□□□ 0.16
RAD23BP54727 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAD23BP54727 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC16.04■□□□□ 0.16
RAD23BP54727 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAD23BP54727 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RAD23BP54727 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAD23BP54727 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAD23BP54727 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAD23BP54727 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RAD23BP54727 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAD23BP54727 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC16.04■□□□□ 0.16
RAD23BP54727 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
RAD23BP54727 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC16.04■□□□□ 0.16
RAD23BP54727 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAD23BP54727 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAD23BP54727 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RAD23BP54727 CLUHP2-201ENST00000426660 1303 ntBASIC16.04■□□□□ 0.16
RAD23BP54727 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
RAD23BP54727 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC16.04■□□□□ 0.16
RAD23BP54727 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RAD23BP54727 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAD23BP54727 LBX2-201ENST00000341396 886 ntTSL 3 BASIC16.04■□□□□ 0.16
RAD23BP54727 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RAD23BP54727 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC16.04■□□□□ 0.16
RAD23BP54727 CNN2P8-201ENST00000421872 913 ntBASIC16.04■□□□□ 0.16
RAD23BP54727 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RAD23BP54727 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC16.04■□□□□ 0.16
RAD23BP54727 C2orf27AP3-201ENST00000434123 579 ntBASIC16.04■□□□□ 0.16
RAD23BP54727 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC16.04■□□□□ 0.16
RAD23BP54727 AL590640.2-201ENST00000457038 527 ntBASIC16.04■□□□□ 0.16
RAD23BP54727 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC16.04■□□□□ 0.16
RAD23BP54727 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC16.04■□□□□ 0.16
RAD23BP54727 KRT90P-201ENST00000549264 1064 ntBASIC16.04■□□□□ 0.16
RAD23BP54727 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC16.04■□□□□ 0.16
RAD23BP54727 APRT-204ENST00000563655 709 ntTSL 5 BASIC16.04■□□□□ 0.16
RAD23BP54727 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC16.04■□□□□ 0.16
RAD23BP54727 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC16.04■□□□□ 0.16
RAD23BP54727 AL512343.1-201ENST00000605837 169 ntBASIC16.04■□□□□ 0.16
RAD23BP54727 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
RAD23BP54727 AL354718.3-201ENST00000616414 581 ntBASIC16.04■□□□□ 0.16
RAD23BP54727 WNT11-204ENST00000621122 789 ntTSL 5 BASIC16.04■□□□□ 0.16
RAD23BP54727 CR382287.1-201ENST00000623954 586 ntBASIC16.04■□□□□ 0.16
RAD23BP54727 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC16.04■□□□□ 0.16
RAD23BP54727 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC16.04■□□□□ 0.16
RAD23BP54727 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC16.04■□□□□ 0.16
RAD23BP54727 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAD23BP54727 AC018529.2-202ENST00000611482 3087 ntBASIC16.04■□□□□ 0.16
RAD23BP54727 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
RAD23BP54727 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
RAD23BP54727 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
RAD23BP54727 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAD23BP54727 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RAD23BP54727 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAD23BP54727 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAD23BP54727 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAD23BP54727 PDIA3P1-201ENST00000471856 1510 ntBASIC16.04■□□□□ 0.16
RAD23BP54727 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RAD23BP54727 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC16.04■□□□□ 0.16
RAD23BP54727 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAD23BP54727 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAD23BP54727 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RAD23BP54727 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAD23BP54727 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RAD23BP54727 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC16.03■□□□□ 0.16
RAD23BP54727 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
RAD23BP54727 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RAD23BP54727 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAD23BP54727 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
RAD23BP54727 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAD23BP54727 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAD23BP54727 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
RAD23BP54727 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC16.03■□□□□ 0.16
RAD23BP54727 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC16.03■□□□□ 0.16
RAD23BP54727 FAM197Y7-201ENST00000432892 766 ntBASIC16.03■□□□□ 0.16
RAD23BP54727 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC16.03■□□□□ 0.16
RAD23BP54727 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC16.03■□□□□ 0.16
RAD23BP54727 RNA5SP486-201ENST00000515961 83 ntBASIC16.03■□□□□ 0.16
RAD23BP54727 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms