Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 PFAS-212ENST00000625942 396 ntTSL 5 BASIC15.14■□□□□ 0.01
LIMK2P53671 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC15.14■□□□□ 0.01
LIMK2P53671 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LIMK2P53671 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC15.14■□□□□ 0.01
LIMK2P53671 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LIMK2P53671 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
LIMK2P53671 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LIMK2P53671 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LIMK2P53671 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC15.14■□□□□ 0.01
LIMK2P53671 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
LIMK2P53671 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC15.14■□□□□ 0.01
LIMK2P53671 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC15.13■□□□□ 0.01
LIMK2P53671 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
LIMK2P53671 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC15.13■□□□□ 0.01
LIMK2P53671 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC15.13■□□□□ 0.01
LIMK2P53671 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
LIMK2P53671 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LIMK2P53671 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC15.13■□□□□ 0.01
LIMK2P53671 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LIMK2P53671 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC15.13■□□□□ 0.01
LIMK2P53671 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC15.13■□□□□ 0.01
LIMK2P53671 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
LIMK2P53671 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
LIMK2P53671 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LIMK2P53671 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
LIMK2P53671 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LIMK2P53671 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
LIMK2P53671 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LIMK2P53671 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
LIMK2P53671 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LIMK2P53671 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LIMK2P53671 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC15.13■□□□□ 0.01
LIMK2P53671 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
LIMK2P53671 AL645937.2-201ENST00000396808 931 ntBASIC15.13■□□□□ 0.01
LIMK2P53671 MPV17-208ENST00000405076 603 ntTSL 5 BASIC15.13■□□□□ 0.01
LIMK2P53671 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.13■□□□□ 0.01
LIMK2P53671 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC15.13■□□□□ 0.01
LIMK2P53671 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LIMK2P53671 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LIMK2P53671 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
LIMK2P53671 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC15.13■□□□□ 0.01
LIMK2P53671 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC15.13■□□□□ 0.01
LIMK2P53671 KRT223P-202ENST00000449164 1292 ntBASIC15.13■□□□□ 0.01
LIMK2P53671 CROCCP4-201ENST00000457096 498 ntBASIC15.13■□□□□ 0.01
LIMK2P53671 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
LIMK2P53671 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC15.13■□□□□ 0.01
LIMK2P53671 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
LIMK2P53671 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC15.13■□□□□ 0.01
LIMK2P53671 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC15.13■□□□□ 0.01
LIMK2P53671 MIR5189-201ENST00000577370 114 ntBASIC15.13■□□□□ 0.01
LIMK2P53671 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC15.13■□□□□ 0.01
LIMK2P53671 AC107373.2-201ENST00000607735 490 ntBASIC15.13■□□□□ 0.01
LIMK2P53671 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC15.13■□□□□ 0.01
LIMK2P53671 MIR6799-201ENST00000620297 69 ntBASIC15.13■□□□□ 0.01
LIMK2P53671 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC15.13■□□□□ 0.01
LIMK2P53671 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LIMK2P53671 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LIMK2P53671 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LIMK2P53671 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LIMK2P53671 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LIMK2P53671 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
LIMK2P53671 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LIMK2P53671 AC055811.4-201ENST00000624039 1754 ntBASIC15.13■□□□□ 0.01
LIMK2P53671 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LIMK2P53671 LINC01230-201ENST00000625222 3017 ntBASIC15.13■□□□□ 0.01
LIMK2P53671 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LIMK2P53671 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LIMK2P53671 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
LIMK2P53671 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
LIMK2P53671 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
LIMK2P53671 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
LIMK2P53671 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LIMK2P53671 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LIMK2P53671 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
LIMK2P53671 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LIMK2P53671 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
LIMK2P53671 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC15.12■□□□□ 0.01
LIMK2P53671 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
LIMK2P53671 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
LIMK2P53671 INTS4P2-202ENST00000614726 2019 ntBASIC15.12■□□□□ 0.01
LIMK2P53671 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
LIMK2P53671 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LIMK2P53671 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LIMK2P53671 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LIMK2P53671 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC15.12■□□□□ 0.01
LIMK2P53671 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LIMK2P53671 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LIMK2P53671 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
LIMK2P53671 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LIMK2P53671 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LIMK2P53671 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LIMK2P53671 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC15.12■□□□□ 0.01
LIMK2P53671 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC15.12■□□□□ 0.01
LIMK2P53671 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC15.12■□□□□ 0.01
LIMK2P53671 SOCS2P1-201ENST00000417727 557 ntBASIC15.12■□□□□ 0.01
LIMK2P53671 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC15.12■□□□□ 0.01
LIMK2P53671 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC15.12■□□□□ 0.01
LIMK2P53671 AC026410.3-201ENST00000514280 936 ntBASIC15.12■□□□□ 0.01
LIMK2P53671 AC104989.1-201ENST00000519711 778 ntBASIC15.12■□□□□ 0.01
LIMK2P53671 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms