Protein–RNA interactions for Protein: P50548

ERF, ETS domain-containing transcription factor ERF, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERFP50548 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC14.56□□□□□ -0.08
ERFP50548 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC14.56□□□□□ -0.08
ERFP50548 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC14.56□□□□□ -0.08
ERFP50548 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC14.56□□□□□ -0.08
ERFP50548 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC14.56□□□□□ -0.08
ERFP50548 AC023141.13-201ENST00000604991 943 ntBASIC14.56□□□□□ -0.08
ERFP50548 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ERFP50548 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ERFP50548 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ERFP50548 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ERFP50548 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ERFP50548 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
ERFP50548 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
ERFP50548 AC104109.2-201ENST00000602919 1418 ntBASIC14.56□□□□□ -0.08
ERFP50548 AC025580.3-201ENST00000617932 1424 ntBASIC14.56□□□□□ -0.08
ERFP50548 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
ERFP50548 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC14.56□□□□□ -0.08
ERFP50548 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ERFP50548 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC14.56□□□□□ -0.08
ERFP50548 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ERFP50548 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ERFP50548 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC14.55□□□□□ -0.08
ERFP50548 AC004241.5-201ENST00000623870 2448 ntBASIC14.55□□□□□ -0.08
ERFP50548 PIAS2-201ENST00000324794 4543 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
ERFP50548 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
ERFP50548 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
ERFP50548 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
ERFP50548 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
ERFP50548 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC14.55□□□□□ -0.08
ERFP50548 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ERFP50548 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
ERFP50548 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
ERFP50548 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ERFP50548 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ERFP50548 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
ERFP50548 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC14.55□□□□□ -0.08
ERFP50548 SYS1-203ENST00000414310 795 ntTSL 3 BASIC14.55□□□□□ -0.08
ERFP50548 AL590627.1-203ENST00000421194 1026 ntBASIC14.55□□□□□ -0.08
ERFP50548 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC14.55□□□□□ -0.08
ERFP50548 EEF1DP4-201ENST00000446006 880 ntBASIC14.55□□□□□ -0.08
ERFP50548 AL139010.1-201ENST00000454878 894 ntBASIC14.55□□□□□ -0.08
ERFP50548 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC14.55□□□□□ -0.08
ERFP50548 AC073389.1-201ENST00000595595 795 ntBASIC14.55□□□□□ -0.08
ERFP50548 AC120114.3-201ENST00000611923 658 ntBASIC14.55□□□□□ -0.08
ERFP50548 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC14.55□□□□□ -0.08
ERFP50548 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC14.55□□□□□ -0.08
ERFP50548 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC14.55□□□□□ -0.08
ERFP50548 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC14.55□□□□□ -0.08
ERFP50548 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC14.55□□□□□ -0.08
ERFP50548 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ERFP50548 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
ERFP50548 BSG-215ENST00000618006 1329 ntTSL 2 BASIC14.55□□□□□ -0.08
ERFP50548 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
ERFP50548 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
ERFP50548 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC14.55□□□□□ -0.08
ERFP50548 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
ERFP50548 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC14.55□□□□□ -0.08
ERFP50548 AC020658.7-201ENST00000624274 2442 ntBASIC14.55□□□□□ -0.08
ERFP50548 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
ERFP50548 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
ERFP50548 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC14.55□□□□□ -0.08
ERFP50548 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ERFP50548 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC14.55□□□□□ -0.08
ERFP50548 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC14.55□□□□□ -0.08
ERFP50548 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ERFP50548 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC14.55□□□□□ -0.08
ERFP50548 POTEE-201ENST00000356920 4159 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ERFP50548 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ERFP50548 SLC6A6P1-201ENST00000413933 1850 ntBASIC14.55□□□□□ -0.08
ERFP50548 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
ERFP50548 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
ERFP50548 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
ERFP50548 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ERFP50548 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
ERFP50548 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
ERFP50548 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ERFP50548 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
ERFP50548 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ERFP50548 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC14.54□□□□□ -0.08
ERFP50548 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ERFP50548 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ERFP50548 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
ERFP50548 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ERFP50548 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
ERFP50548 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
ERFP50548 AC022447.6-201ENST00000515522 438 ntBASIC14.54□□□□□ -0.08
ERFP50548 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ERFP50548 CD63-204ENST00000546939 779 ntTSL 3 BASIC14.54□□□□□ -0.08
ERFP50548 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC14.54□□□□□ -0.08
ERFP50548 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ERFP50548 RPL18-209ENST00000550645 463 ntTSL 5 BASIC14.54□□□□□ -0.08
ERFP50548 RPL18-214ENST00000552588 559 ntTSL 3 BASIC14.54□□□□□ -0.08
ERFP50548 AC096734.2-201ENST00000562054 433 ntBASIC14.54□□□□□ -0.08
ERFP50548 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC14.54□□□□□ -0.08
ERFP50548 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ERFP50548 MED16-214ENST00000617672 554 ntTSL 5 BASIC14.54□□□□□ -0.08
ERFP50548 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC14.54□□□□□ -0.08
ERFP50548 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC14.54□□□□□ -0.08
ERFP50548 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ERFP50548 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms