Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
CENPFP49454 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CENPFP49454 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC16.43■□□□□ 0.22
CENPFP49454 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC16.43■□□□□ 0.22
CENPFP49454 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CENPFP49454 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CENPFP49454 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC16.42■□□□□ 0.22
CENPFP49454 MED7-202ENST00000420343 1382 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CENPFP49454 AL591122.2-201ENST00000624125 1853 ntBASIC16.42■□□□□ 0.22
CENPFP49454 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CENPFP49454 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC16.42■□□□□ 0.22
CENPFP49454 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC16.42■□□□□ 0.22
CENPFP49454 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC16.42■□□□□ 0.22
CENPFP49454 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC16.42■□□□□ 0.22
CENPFP49454 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CENPFP49454 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CENPFP49454 ZEB1-AS1-208ENST00000607166 2503 ntBASIC16.42■□□□□ 0.22
CENPFP49454 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CENPFP49454 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CENPFP49454 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC16.42■□□□□ 0.22
CENPFP49454 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC16.42■□□□□ 0.22
CENPFP49454 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC16.42■□□□□ 0.22
CENPFP49454 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CENPFP49454 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CENPFP49454 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC16.42■□□□□ 0.22
CENPFP49454 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CENPFP49454 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.42■□□□□ 0.22
CENPFP49454 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CENPFP49454 PTPA-215ENST00000432124 567 ntTSL 4 BASIC16.42■□□□□ 0.22
CENPFP49454 AL157392.3-204ENST00000440878 397 ntTSL 3 BASIC16.42■□□□□ 0.22
CENPFP49454 AC010900.1-201ENST00000449849 1296 ntBASIC16.42■□□□□ 0.22
CENPFP49454 F11R-204ENST00000537746 1245 ntTSL 2 BASIC16.42■□□□□ 0.22
CENPFP49454 CYP4F36P-201ENST00000589193 186 ntBASIC16.42■□□□□ 0.22
CENPFP49454 MIR6125-201ENST00000618986 96 ntBASIC16.42■□□□□ 0.22
CENPFP49454 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CENPFP49454 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CENPFP49454 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC16.42■□□□□ 0.22
CENPFP49454 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CENPFP49454 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC16.42■□□□□ 0.22
CENPFP49454 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CENPFP49454 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
CENPFP49454 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CENPFP49454 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.42■□□□□ 0.22
CENPFP49454 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CENPFP49454 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
CENPFP49454 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CENPFP49454 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC16.41■□□□□ 0.22
CENPFP49454 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
CENPFP49454 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
CENPFP49454 LINC01885-201ENST00000414300 609 ntTSL 4 BASIC16.41■□□□□ 0.22
CENPFP49454 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CENPFP49454 GLUD1P3-201ENST00000507952 896 ntTSL 2 BASIC16.41■□□□□ 0.22
CENPFP49454 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC16.41■□□□□ 0.22
CENPFP49454 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC16.41■□□□□ 0.22
CENPFP49454 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC16.41■□□□□ 0.22
CENPFP49454 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CENPFP49454 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CENPFP49454 AKR1B1-201ENST00000285930 1409 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CENPFP49454 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC16.41■□□□□ 0.22
CENPFP49454 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CENPFP49454 PTGER4P2-201ENST00000328411 252 ntBASIC16.41■□□□□ 0.22
CENPFP49454 AL356417.1-201ENST00000421161 845 ntTSL 3 BASIC16.41■□□□□ 0.22
CENPFP49454 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CENPFP49454 PTGER4P3-201ENST00000458150 252 ntBASIC16.41■□□□□ 0.22
CENPFP49454 KLF3-AS1-203ENST00000504219 627 ntTSL 3 BASIC16.41■□□□□ 0.22
CENPFP49454 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC16.41■□□□□ 0.22
CENPFP49454 TRMT112P3-201ENST00000580149 358 ntBASIC16.41■□□□□ 0.22
CENPFP49454 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CENPFP49454 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CENPFP49454 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CENPFP49454 AP003900.1-201ENST00000622592 859 ntTSL 3 BASIC16.41■□□□□ 0.22
CENPFP49454 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.41■□□□□ 0.22
CENPFP49454 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CENPFP49454 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC16.41■□□□□ 0.22
CENPFP49454 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CENPFP49454 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
CENPFP49454 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CENPFP49454 AP002353.1-201ENST00000528257 1599 ntBASIC16.41■□□□□ 0.22
CENPFP49454 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CENPFP49454 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CENPFP49454 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC16.41■□□□□ 0.22
CENPFP49454 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC16.41■□□□□ 0.22
CENPFP49454 AC018529.2-202ENST00000611482 3087 ntBASIC16.41■□□□□ 0.22
CENPFP49454 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CENPFP49454 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC16.41■□□□□ 0.22
CENPFP49454 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC16.41■□□□□ 0.22
CENPFP49454 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC16.41■□□□□ 0.22
CENPFP49454 AC142086.5-202ENST00000562500 217 ntBASIC16.41■□□□□ 0.22
CENPFP49454 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC16.41■□□□□ 0.22
CENPFP49454 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CENPFP49454 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CENPFP49454 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CENPFP49454 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC16.4■□□□□ 0.22
CENPFP49454 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CENPFP49454 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CENPFP49454 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CENPFP49454 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC16.4■□□□□ 0.22
CENPFP49454 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.4■□□□□ 0.22
CENPFP49454 AC006529.1-201ENST00000459978 637 ntBASIC16.4■□□□□ 0.22
CENPFP49454 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms